RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 BLACEA4D250 179 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 TRABD2BA6NFA1 517 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 C9J4A7 227 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 STMND1H3BQB6 276 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 PSMD12O00232 456 aaPredicted RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 MEN1O00255 615 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 SAP18O00422 153 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 PLPP1O14494 284 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 PEX11AO75192 247 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 SH3BGRLO75368 114 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 STK17BO94768 372 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 KLHL18O94889 574 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 KLK1P06870 262 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 ACPPP15309 386 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 ALOX15P16050 662 aaPredicted RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 DDX5P17844 614 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 LBPP18428 481 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 ATP5A1P25705 553 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 SLC5A2P31639 672 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 AQP5P55064 265 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 TRA2BP62995 288 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 EMX2Q04743 252 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 TBL3Q12788 808 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 GALNTL6Q49A17 601 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 GALNT18Q6P9A2 607 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 EPGNQ6UW88 154 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 SPATA19Q7Z5L4 167 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 ZFAND4Q86XD8 727 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 RNF175Q8N4F7 328 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 ARHGEF39Q8N4T4 335 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 C1orf52Q8N6N3 182 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 ACOT4Q8N9L9 421 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 FNDC5Q8NAU1 212 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 ACTRT2Q8TDY3 377 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 PRR11Q96HE9 360 aaPredicted RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 C10orf90Q96M02 699 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 CCDC28BQ9BUN5 200 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 MRPL1Q9BYD6 325 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 EPN3Q9H201 632 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 AKTIPQ9H8T0 292 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 NPHS2Q9NP85 383 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 LYARQ9NX58 379 aaKnown RBP13.55□□□□□ -0.24
SKA2-205ENST00000580541 PHF11Q9UIL8 331 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 MCM8Q9UJA3 840 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 TRIM33Q9UPN9 1127 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 CCL27Q9Y4X3 112 aa13.55□□□□□ -0.24
SKA2-205ENST00000580541 SCN3AQ9NY46 2000 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 A0A0A6YYC8 382 aaPredicted RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 ATP6AP2A0A1C7CYW4 349 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 CDRT15L2A8MXV6 281 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 C9orf172C9J069 976 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 I3L1I5 382 aaPredicted RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 LSM1O15116 133 aaKnown RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 ATP6AP2O75787 350 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 SCELO95171 688 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 ETHE1O95571 254 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 TBX6O95947 436 aaPredicted RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 ONECUT2O95948 504 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 ALBP02768 609 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 CTSBP07858 339 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 PRPS2P11908 318 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 IL1RNP18510 177 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 FBLP22087 321 aaKnown RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 BSGP35613 385 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 GCGRP47871 477 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 MAPK12P53778 367 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 ERVK-8P63133 956 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 OCA2Q04671 838 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 SLAMF1Q13291 335 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 CAMK2BQ13554 666 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 DSG2Q14126 1118 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 NKAIN1Q4KMZ8 207 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 C6orf136Q5SQH8 315 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 ARHGAP40Q5TG30 622 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 COMMD6Q7Z4G1 85 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 DSELQ8IZU8 1212 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 NLGN4XQ8N0W4 816 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 NLGN4YQ8NFZ3 816 aaPredicted RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 OR9A4Q8NGU2 314 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 PPP1R36Q96LQ0 422 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 RILPQ96NA2 401 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 YIPF2Q9BWQ6 316 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 FAIM2Q9BWQ8 316 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 SYNPO2LQ9H987 977 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 WDR41Q9HAD4 459 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 NOP53Q9NZM5 478 aaKnown RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 KLHL14Q9P2G3 628 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 IFT80Q9P2H3 777 aaPredicted RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 DHCR7Q9UBM7 475 aaKnown RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 MRPS33Q9Y291 106 aaKnown RBP13.54□□□□□ -0.24
SKA2-205ENST00000580541 MAP4K5Q9Y4K4 846 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
SKA2-205ENST00000580541 A0A0G2JND7 137 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms