RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 ADPRMQ3LIE5 342 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 MROH9Q5TGP6 573 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ZNF324BQ6AW86 544 aaPredicted RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 FAM180AQ6UWF9 173 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TBC1D1Q86TI0 1168 aaPredicted RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 KRT78Q8N1N4 520 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 MMGT1Q8N4V1 131 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TMEM52Q8NDY8 209 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TTLQ8NG68 377 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 STAG3L4Q8TBR4 150 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 M1APQ8TC57 530 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 PTCD3Q96EY7 689 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 PTCHD1Q96NR3 888 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 QRFPRQ96P65 431 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CD244Q9BZW8 370 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSH2-205ENST00000577483 RHBGQ9H310 441 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 KCNK13Q9HB14 408 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 STMN3Q9NZ72 180 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 NUDT4Q9NZJ9 180 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CLDN16Q9Y5I7 305 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 POLEQ07864 2286 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TCRBV16S1A1N1A0A5B0 115 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TGFBR3LH3BV60 316 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 PRMT3O60678 531 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 KERAO60938 352 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 SUPT3HO75486 399 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CLEC3AO75596 197 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 S100BP04271 92 aaPredicted RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 C2P06681 752 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 GP1BBP13224 206 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 RNH1P13489 461 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 GSTM2P28161 218 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CRABP2P29373 138 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TDGF1P3P51864 188 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 HNRNPFP52597 415 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 CHIT1Q13231 466 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ACER2Q5QJU3 275 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 HIST2H2BCQ6DN03 193 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 LRRC70Q7Z2Q7 622 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ELP5Q8TE02 316 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 UBTD2Q8WUN7 234 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 SIGLEC12Q96PQ1 595 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CAPS2Q9BXY5 557 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 PITHD1Q9GZP4 211 aaPredicted RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 REXO4Q9GZR2 422 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 CDC42EP4Q9H3Q1 356 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CLK4Q9HAZ1 481 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 NMRAL1Q9HBL8 299 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TEKT2Q9UIF3 430 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ANKDD1BA6NHY2 528 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 SAGE2PA6NJ88 616 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 ALDOAP04075 364 aaKnown RBP11.88□□□□□ -0.51
SSH2-205ENST00000577483 EDN3P14138 238 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 CERS1P27544 350 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 PLA2G16P53816 162 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 PMP22Q01453 160 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 ACTN3Q08043 901 aaPredicted RBP11.88□□□□□ -0.51
SSH2-205ENST00000577483 ELOAQ14241 798 aaKnown RBP11.88□□□□□ -0.51
SSH2-205ENST00000577483 UAP1Q16222 522 aaPredicted RBP11.88□□□□□ -0.51
SSH2-205ENST00000577483 INAQ16352 499 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 RELL1Q8IUW5 271 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 SCUBE1Q8IWY4 988 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 BCORP1Q8N888 145 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 OR2L5Q8NG80 312 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 SEC16BQ96JE7 1060 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 FAR2Q96K12 515 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 CSF3RQ99062 836 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 EFCAB11Q9BUY7 163 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 PRDM9Q9NQV7 894 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 OLAHQ9NV23 265 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 ACOT9Q9Y305 439 aa11.88□□□□□ -0.51
SSH2-205ENST00000577483 GTF3C1Q12789 2109 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 A0A087X1B8 175 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 A0A096LPK6 155 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 A8MUA0 341 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 PSMD12O00232 456 aaPredicted RBP11.87□□□□□ -0.51
SSH2-205ENST00000577483 PRAMEF2O60811 474 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 ACSL3O95573 720 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 LDLRP01130 860 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 PPP2R1BP30154 601 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 CASP2P42575 452 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 IRF8Q02556 426 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 TUBA3CQ13748 450 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 TBCCQ15814 346 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 MEP1AQ16819 746 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 TRIM40Q6P9F5 258 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 ABHD17CQ6PCB6 329 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 TUBA3EQ6PEY2 450 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 FAM47BQ8NA70 645 aa11.87□□□□□ -0.51
SSH2-205ENST00000577483 MDS2Q8NDY4 140 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms