RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CD200R1Q8TD46 325 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 CALML6Q8TD86 181 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 ASB15Q8WXK1 588 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 HIST1H2AHQ96KK5 128 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 GPR21Q99679 349 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 HIST1H2AJQ99878 128 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 GPATCH1Q9BRR8 931 aaKnown RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 H2AFJQ9BTM1 129 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 GSX1Q9H4S2 264 aaPredicted RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 PARVBQ9HBI1 364 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 ZNF358Q9NW07 568 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 TRMT6Q9UJA5 497 aaKnown RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 RPH3AQ9Y2J0 694 aaPredicted RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 SPG11Q96JI7 2443 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 FAM166BA8MTA8 275 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 A8MUA0 341 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 SLC16A5O15375 505 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 PROM1O43490 865 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 ZFAND5O76080 213 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 GLI4P10075 376 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 NPPBP16860 134 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 AHRP35869 848 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 WLSQ5T9L3 541 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 HECTD2Q5U5R9 776 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 WDR53Q7Z5U6 358 aaPredicted RBP12.43□□□□□ -0.42
COPS3-214ENST00000577246 MYO1HQ8N1T3 1032 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 FAM109AQ8N4B1 249 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 TRPV3Q8NET8 790 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 OR4K1Q8NGD4 311 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 SARAFQ96BY9 339 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 TTTY12Q9BZ98 90 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 ATG10Q9H0Y0 220 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 FBXO6Q9NRD1 293 aaPredicted RBP12.43□□□□□ -0.42
COPS3-214ENST00000577246 ZFATQ9P243 1243 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 ZFP69BQ9UJL9 534 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 ACAD8Q9UKU7 415 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 PPIEQ9UNP9 301 aaKnown RBP12.43□□□□□ -0.42
COPS3-214ENST00000577246 SH2B3Q9UQQ2 575 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 PLEKHA6Q9Y2H5 1048 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 ZKSCAN5Q9Y2L8 839 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 MED16Q9Y2X0 877 aa12.43□□□□□ -0.42
COPS3-214ENST00000577246 HEATR5BQ9P2D3 2071 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 A0A0G2JNJ9 132 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 CLDN4O14493 209 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 AQP7O14520 342 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 SUSD5O60279 629 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 IGHG3P01860 377 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 GABRA1P14867 456 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 DLX5P56178 289 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 ADAM8P78325 824 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 LTBQ06643 244 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 GTF3C1Q12789 2109 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 CTBP1Q13363 440 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 CSHL1Q14406 222 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 DUPD1Q68J44 220 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 RAD9BQ6WBX8 426 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
COPS3-214ENST00000577246 UTP15Q8TED0 518 aaKnown RBP12.42□□□□□ -0.42
COPS3-214ENST00000577246 FAM222BQ8WU58 562 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 MAIP1Q8WWC4 291 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 ATL1Q8WXF7 558 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 SNF8Q96H20 258 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 FAM173AQ9BQD7 235 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 TRIM54Q9BYV2 358 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 RHBGQ9H310 441 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 IL1RL2Q9HB29 575 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 NECTIN3Q9NQS3 549 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 Q9UFV3 132 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 FAM215AQ9Y5M1 114 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 MAD1L1Q9Y6D9 718 aa12.42□□□□□ -0.42
COPS3-214ENST00000577246 A0A1B0GVC2 190 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 A6NNC1 897 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 OR2J2O76002 312 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 RAF1P04049 648 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 SLC1A2P43004 574 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 MAN2A2P49641 1150 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 HCFC1P51610 2035 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 AP1S2P56377 157 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 HYAL2Q12891 473 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 SKOR2Q2VWA4 1001 aaPredicted RBP12.41□□□□□ -0.42
COPS3-214ENST00000577246 FLYWCH1Q4VC44 716 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 C1orf185Q5T7R7 199 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 RIPPLY2Q5TAB7 128 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 ZNF549Q6P9A3 640 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 PAMR1Q6UXH9 720 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 IL20RBQ6UXL0 311 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 RTL4Q6ZR62 310 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 TRILQ7L0X0 811 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 CDC20BQ86Y33 519 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 DENND6AQ8IWF6 608 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
COPS3-214ENST00000577246 NCLNQ969V3 563 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 ZNF669Q96BR6 464 aaPredicted RBP12.41□□□□□ -0.42
COPS3-214ENST00000577246 PDLIM2Q96JY6 352 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 SGCZQ96LD1 299 aa12.41□□□□□ -0.42
COPS3-214ENST00000577246 PWWP2AQ96N64 755 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms