RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 SMSP52788 366 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 AP2B1P63010 937 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 BTN3A2P78410 334 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 MRPS25P82663 173 aaKnown RBP11.22□□□□□ -0.61
PRPF8-215ENST00000576958 TLE4Q04727 773 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
PRPF8-215ENST00000576958 SNTB1Q13884 538 aaKnown RBP11.22□□□□□ -0.61
PRPF8-215ENST00000576958 KRTCAP3Q53RY4 240 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 MEX3BQ6ZN04 569 aaKnown RBP11.22□□□□□ -0.61
PRPF8-215ENST00000576958 QSOX2Q6ZRP7 698 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 VN1R5Q7Z5H4 357 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 ANKMY2Q8IV38 441 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 GHDCQ8N2G8 530 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 ACBD4Q8NC06 268 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 CALML6Q8TD86 181 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 DOK4Q8TEW6 326 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 ESAMQ96AP7 390 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 SPG11Q96JI7 2443 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 OSBPL9Q96SU4 736 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
PRPF8-215ENST00000576958 HOMER3Q9NSC5 361 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 KCMF1Q9P0J7 381 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 HRNRQ86YZ3 2850 aaPredicted RBP11.21□□□□□ -0.61
PRPF8-215ENST00000576958 DNALI1O14645 258 aaPredicted RBP11.21□□□□□ -0.61
PRPF8-215ENST00000576958 TP73O15350 636 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 PEX1O43933 1283 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 DIAPH2O60879 1101 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 ITGA10O75578 1167 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 CELA3AP09093 270 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 TRHRP34981 398 aaPredicted RBP11.21□□□□□ -0.61
PRPF8-215ENST00000576958 GRK3P35626 688 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 HLCSP50747 726 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 GPR143P51810 404 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 TAS2R50P59544 299 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 IL2P60568 153 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 ID2Q02363 134 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 PWP1Q13610 501 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 CSHL1Q14406 222 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 MTFR2Q6P444 385 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 NXPE4Q6UWF7 544 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 SCUBE1Q8IWY4 988 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 PALM2Q8IXS6 379 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 LMNTD2Q8IXW0 634 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 FAM57AQ8TBR7 257 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 NCLNQ969V3 563 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 HAUS8Q9BT25 410 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 ENKD1Q9H0I2 346 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 TRIM45Q9H8W5 580 aaPredicted RBP11.21□□□□□ -0.61
PRPF8-215ENST00000576958 PRDM9Q9NQV7 894 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 SMYD2Q9NRG4 433 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 TRMT1Q9NXH9 659 aaKnown RBP11.21□□□□□ -0.61
PRPF8-215ENST00000576958 FBXW2Q9UKT8 454 aa11.21□□□□□ -0.61
PRPF8-215ENST00000576958 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.62
PRPF8-215ENST00000576958 NCKAP5O14513 1909 aa11.21□□□□□ -0.62
PRPF8-215ENST00000576958 NCF1BA6NI72 391 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 NCF1CA8MVU1 366 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 E9PLN8 166 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 PGRMC1O00264 195 aaKnown RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 TFECO14948 347 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 SH3BGRLO75368 114 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 OR6B1O95007 311 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 HIST1H2AGP0C0S8 130 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 RNH1P13489 461 aaKnown RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 NCF1P14598 390 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 TFEBP19484 476 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 HIST1H2ADP20671 130 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 AGAP20933 346 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CCND1P24385 295 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CERS1P27544 350 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 TFF3Q07654 80 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 RGS1Q08116 209 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 SLBPQ14493 270 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 TSNQ15631 228 aaKnown RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 ZNF750Q32MQ0 723 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 SPANXN3Q5MJ09 141 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 ARMC3Q5W041 872 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 ABHD13Q7L211 337 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CDH24Q86UP0 819 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CYP4Z2PQ8N1L4 340 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 OR5M9Q8NGP3 310 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CCT6BQ92526 530 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 PBKQ96KB5 322 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 HIST1H2AHQ96KK5 128 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CAPZA3Q96KX2 299 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 QRFPRQ96P65 431 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 HIST1H2AJQ99878 128 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 VKORC1Q9BQB6 163 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 TMEM79Q9BSE2 394 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 H2AFJQ9BTM1 129 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 DEFB126Q9BYW3 111 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 CAB39LQ9H9S4 337 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 ASIC3Q9UHC3 531 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 RNF6Q9Y252 685 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 VWA7Q9Y334 891 aa11.2□□□□□ -0.62
PRPF8-215ENST00000576958 MAP1AP78559 2803 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-215ENST00000576958 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms