RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 P3H1Q32P28 736 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 WIPI1Q5MNZ9 446 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 SEM1Q6ZVN7 128 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 VN1R4Q7Z5H5 301 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 LINC00523Q86TU6 105 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 LRRC6Q86X45 466 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 PDSS2Q86YH6 399 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 HIPK1Q86Z02 1210 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 LRRC8AQ8IWT6 810 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMG6-219ENST00000575663 TXLNBQ8N3L3 684 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 GOLM1Q8NBJ4 401 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 FBXO15Q8NCQ5 510 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 PPFIBP2Q8ND30 876 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 NFAM1Q8NET5 270 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 TNIP2Q8NFZ5 429 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 OR13J1Q8NGT2 312 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 OR6P1Q8NGX9 317 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SLC35G2Q8TBE7 412 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SLC13A3Q8WWT9 602 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 KIAA1191Q96A73 305 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 NTNG2Q96CW9 530 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CAPZA3Q96KX2 299 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SGCZQ96LD1 299 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 FAM210AQ96ND0 272 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 AARSD1Q9BTE6 412 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 RBM24Q9BX46 236 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 PACSIN1Q9BY11 444 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CXorf56Q9H5V9 222 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ZNF703Q9H7S9 590 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 PRDM9Q9NQV7 894 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 TMEM184CQ9NVA4 438 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ZNHIT6Q9NWK9 470 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 ADGRE2Q9UHX3 823 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 TSR3Q9UJK0 312 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 CAPN11Q9UMQ6 739 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 BOKQ9UMX3 212 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 RTTNQ86VV8 2226 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 IGKV3D-11A0A0A0MRZ8 115 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 C15orf38-AP3S2A0A0A6YYH1 394 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 E7ENX8 843 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 H3BMM5 538 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 H7BY64 318 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 KIF2AO00139 706 aaPredicted RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 PFDN6O15212 129 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 PSMD3O43242 534 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 GALR3O60755 368 aaPredicted RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 PEX14O75381 377 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 OR2J2O76002 312 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 MATN4O95460 622 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 SLC16A8O95907 504 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 SYF2O95926 243 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 IL18BPO95998 194 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 FAM157CP0CG43 387 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 RBP3P10745 1247 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 RPS3P23396 243 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMG6-219ENST00000575663 CTSSP25774 331 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 SOX3P41225 446 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 DNASE1L1P49184 302 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 EIF3EP60228 445 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 ZBED6P86452 979 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 TAP2Q03519 686 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 RGS1Q08116 209 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 TBL3Q12788 808 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 CDH17Q12864 832 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 HYAL2Q12891 473 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 VEZF1Q14119 521 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 BBS9Q3SYG4 887 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 DEFB134Q4QY38 66 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 C10orf62Q5T681 223 aaPredicted RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 TSTD2Q5T7W7 516 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 HECTD2Q5U5R9 776 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 NSUN5P2Q63ZY6 315 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 CAPN13Q6MZZ7 669 aaPredicted RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 DARS2Q6PI48 645 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 OPN5Q6U736 354 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 BBS12Q6ZW61 710 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 ABHD13Q7L211 337 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 SLC26A11Q86WA9 606 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 KLHDC8BQ8IXV7 354 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 CCDC170Q8IYT3 715 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 KATNAL2Q8IYT4 538 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 SHISA5Q8N114 240 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 MPP5Q8N3R9 675 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 KCT2Q8NC54 265 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 PPHLN1Q8NEY8 458 aaKnown RBP5.44□□□□□ -1.54
SMG6-219ENST00000575663 OR5T3Q8NGG3 340 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 OR8K1Q8NGG5 319 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 NEIL3Q8TAT5 605 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 ZNF480Q8WV37 535 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 TMEM171Q8WVE6 324 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 NCLNQ969V3 563 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 PRAP1Q96NZ9 151 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 RASL10BQ96S79 203 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 PKP4Q99569 1192 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 DNAJC7Q99615 494 aa5.44□□□□□ -1.54
SMG6-219ENST00000575663 MACROD1Q9BQ69 325 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms