RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SNX6Q9UNH7 406 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 AGPSO00116 658 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 CTIFO43310 598 aaKnown RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 OR4F21O95013 312 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 RNH1P13489 461 aaKnown RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 JAK1P23458 1154 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 NAGLUP54802 743 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 MTTPP55157 894 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 PKNOX1P55347 436 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 DNAJB13P59910 316 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 OLR1P78380 273 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 RCN2Q14257 317 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 LINC00303Q3SY05 128 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 GGTA1PQ4G0N0 100 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 DEPDC1Q5TB30 811 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 KHDRBS2Q5VWX1 349 aaKnown RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 LIPMQ5VYY2 423 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 FRG2Q64ET8 278 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 ABHD17CQ6PCB6 329 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 APLFQ8IW19 511 aaPredicted RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 ZC3H7AQ8IWR0 971 aaKnown RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 LSM14AQ8ND56 463 aaKnown RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 OR5T3Q8NGG3 340 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 WDR20Q8TBZ3 569 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 TCP10LQ8TDR4 215 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 RGMAQ96B86 450 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 TBC1D20Q96BZ9 403 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 FRG2BQ96QU4 278 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 SERINC2Q96SA4 455 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 ZNF382Q96SR6 550 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 TBCDQ9BTW9 1192 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 AICDAQ9GZX7 198 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 ING2Q9H160 280 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 OR51B5Q9H339 312 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 DMRT3Q9NQL9 472 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 OXSMQ9NWU1 459 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 P4HTMQ9NXG6 502 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 PSD3Q9NYI0 1048 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 TRPS1Q9UHF7 1281 aa14.37□□□□□ -0.11
LITAF-217ENST00000575426 G3BP2Q9UN86 482 aaKnown RBP14.37□□□□□ -0.11
LITAF-217ENST00000575426 EIF4E1BA6NMX2 242 aaKnown RBP14.36□□□□□ -0.11
LITAF-217ENST00000575426 MAGEB17A8MXT2 336 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 H3BQF6 201 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 FOXE1O00358 373 aaPredicted RBP14.36□□□□□ -0.11
LITAF-217ENST00000575426 ATXN7O15265 892 aaPredicted RBP14.36□□□□□ -0.11
LITAF-217ENST00000575426 CYC1P08574 325 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 HMOX2P30519 316 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 CCL11P51671 97 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 NEK2P51955 445 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 POLE2P56282 527 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 RPS13P62277 151 aaKnown RBP14.36□□□□□ -0.11
LITAF-217ENST00000575426 LCP2Q13094 533 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 TUBB8Q3ZCM7 444 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 FAAH2Q6GMR7 532 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 GPRIN3Q6ZVF9 776 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 PPP1R32Q7Z5V6 425 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 C10orf107Q8IVU9 208 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 RNF175Q8N4F7 328 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 CLEC1AQ8NC01 280 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 ADAMTS18Q8TE60 1221 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 PGM2Q96G03 612 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 SERPINI1Q99574 410 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 ADNPQ9H2P0 1102 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 C19orf25Q9UFG5 118 aaPredicted RBP14.36□□□□□ -0.11
LITAF-217ENST00000575426 MRPS33Q9Y291 106 aaKnown RBP14.36□□□□□ -0.11
LITAF-217ENST00000575426 HS3ST3B1Q9Y662 390 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 SPACA6W5XKT8 324 aa14.36□□□□□ -0.11
LITAF-217ENST00000575426 DOCK10Q96BY6 2186 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 C4orf51C9J302 202 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 MKRN2OSH3BPM6 223 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SAP18O00422 153 aaKnown RBP14.35□□□□□ -0.11
LITAF-217ENST00000575426 PPP6CO00743 305 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SOCS6O14544 535 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 TRIM13O60858 407 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 B4GALT2O60909 372 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 ALOX12BO75342 701 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 JRKO75564 520 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 CRCPO75575 148 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 TBX6O95947 436 aaPredicted RBP14.35□□□□□ -0.11
LITAF-217ENST00000575426 KRT6AP02538 564 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 KRT6BP04259 564 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 FHP07954 510 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 FAM87AP0C7U9 286 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 C8orf89P0DMQ9 161 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 ACPPP15309 386 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SSR2P43308 183 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 TSFMP43897 325 aaKnown RBP14.35□□□□□ -0.11
LITAF-217ENST00000575426 KRT6CP48668 564 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 ARFIP1P53367 373 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 CUL3Q13618 768 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 RUNX2Q13950 521 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SGO1Q5FBB7 561 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 OR4C11Q6IEV9 310 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 LETMD1Q6P1Q0 360 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 EXOC3L1Q86VI1 746 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 TMEM151BQ8IW70 566 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 CA13Q8N1Q1 262 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms