RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 SPDYAQ5MJ70 313 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 MLIPQ5VWP3 458 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 KHDRBS2Q5VWX1 349 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 TRIM40Q6P9F5 258 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 TRIM46Q7Z4K8 759 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 LRRC34Q8IZ02 419 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 METTL27Q8N6F8 245 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 CT55Q8WUE5 264 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 GAL3ST3Q96A11 431 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 RGMAQ96B86 450 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 MS4A6EQ96DS6 147 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 MMABQ96EY8 250 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 THOC1Q96FV9 657 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 C3orf30Q96M34 536 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 SERPINI1Q99574 410 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 YIPF2Q9BWQ6 316 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 SLC6A16Q9GZN6 736 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 BRF2Q9HAW0 419 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 NMRK1Q9NWW6 199 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 VPS29Q9UBQ0 182 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 VTI1BQ9UEU0 232 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 KCND3Q9UK17 655 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 CROTQ9UKG9 612 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 PADI2Q9Y2J8 665 aa12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 MRPS2Q9Y399 296 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-214ENST00000573876 SCN3AQ9NY46 2000 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 A0A0A6YYC8 382 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 A0A0G2JN53 185 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 LOC101059948A0A1B0GTJ6 334 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ATP6AP2A0A1C7CYW4 349 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 H0YIG0 161 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 I3L1I5 382 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 HDAC3O15379 428 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ERI3O43414 337 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 RGS14O43566 566 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ATP6AP2O75787 350 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 KLHL18O94889 574 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 MED26O95402 600 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 B3GALT4O96024 378 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 JUNP05412 331 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 RAB40ALP0C0E4 278 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ZNF888P0CJ79 500 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 HSD3B1P14060 373 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 IL1RNP18510 177 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 HSD3B2P26439 372 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 OR1D4P47884 311 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 RAP1GDS1P52306 607 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 SEC24CP53992 1094 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 BTN3A2P78410 334 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 CSTF3Q12996 717 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 CUL3Q13618 768 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 DSG2Q14126 1118 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ADPRMQ3LIE5 342 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ZNF385CQ66K41 422 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 Q6ZSR9 355 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 VASH2Q86V25 355 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 OR2L5Q8NG80 312 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 OR9A4Q8NGU2 314 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 UTP15Q8TED0 518 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 CCT7Q99832 543 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 GPR87Q9BY21 358 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ACPTQ9BZG2 426 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ROGDIQ9GZN7 287 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 COPS7BQ9H9Q2 264 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 CLK4Q9HAZ1 481 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 FGFR1OP2Q9NVK5 253 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 FARSAQ9Y285 508 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 USH1CQ9Y6N9 552 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 MAU2Q9Y6X3 613 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 PKD1L2Q7Z442 2459 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 CELSR3Q9NYQ7 3312 aa12.23□□□□□ -0.45
NPLOC4-214ENST00000573876 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 GMNCA6NCL1 334 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 TRPC5OSA6NMA1 111 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 RTCAO00442 366 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 FOXS1O43638 330 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 PEX11AO75192 247 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 SEC22BO75396 215 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 ONECUT2O95948 504 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 ALBP02768 609 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 SMIM10L1P0DMW3 83 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 LSP1P33241 339 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 UCNP55089 124 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 MC1RQ01726 317 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 OCA2Q04671 838 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.452e-8■■■■□ 20.1
NPLOC4-214ENST00000573876 NCF4Q15080 339 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 AP5B1Q2VPB7 878 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 DEFB134Q4QY38 66 aa12.22□□□□□ -0.45
NPLOC4-214ENST00000573876 VWA5B1Q5TIE3 1220 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms