RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CDK6Q00534 326 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 OTOP2Q7RTS6 562 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CCDC190Q86UF4 302 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 NLRP8Q86W28 1048 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CHST14Q8NCH0 376 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 GOT1L1Q8NHS2 421 aaPredicted RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 GEMIN6Q8WXD5 167 aaKnown RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 PIK3R3Q92569 461 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CIDECQ96AQ7 238 aaPredicted RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 TMEM159Q96B96 161 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ZNF486Q96H40 463 aaPredicted RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 SAMD11Q96NU1 681 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 TSEN34Q9BSV6 310 aaKnown RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 EMILIN2Q9BXX0 1053 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 C1GALT1Q9NS00 363 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 C14orf119Q9NWQ9 140 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ATP6V1HQ9UI12 483 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 HS3ST2Q9Y278 367 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PRAMEF33A0A0G2JMD5 474 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CCRL2O00421 344 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PRAMEF10O60809 474 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CCNKO75909 580 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 AP2A2O94973 939 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CCNB2O95067 398 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 GADD45GO95257 159 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 S100A1P23297 94 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 HLA-FP30511 346 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 XCR1P46094 333 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 MC1RQ01726 317 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 FCHO2Q0JRZ9 810 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ELOAQ14241 798 aaKnown RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 TRIM40Q6P9F5 258 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 Q6ZVL8 140 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 HTR3DQ70Z44 454 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 HSD11B1LQ7Z5J1 315 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ATCAYQ86WG3 371 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CPXM2Q8N436 756 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 LILRA3Q8N6C8 439 aaPredicted RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 AQP11Q8NBQ7 271 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 IL17RDQ8NFM7 739 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 OR5AK3PQ8NH89 298 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CXorf40BQ96DE9 158 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PKP4Q99569 1192 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ERVK13-1Q9NX77 482 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 RHCGQ9UBD6 479 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 INSL5Q9Y5Q6 135 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ARHGAP33O14559 1287 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 TSPAN6O43657 245 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 CATP04040 527 aaKnown RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 POU1F1P28069 291 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 IMPA1P29218 277 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 CHI3L1P36222 383 aaPredicted RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 POLR2LP62875 67 aaKnown RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 IFITM2Q01629 132 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 ZNF763Q0D2J5 394 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 TOR1AIP1Q5JTV8 583 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 RSBN1Q5VWQ0 802 aaPredicted RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 MED27Q6P2C8 311 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 RNF130Q86XS8 419 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 OXR1Q8N573 874 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 WDR36Q8NI36 951 aaKnown RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 NEIL2Q969S2 332 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 MAPKAP1Q9BPZ7 522 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 SLC30A2Q9BRI3 323 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 TMEM38AQ9H6F2 299 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 NEK6Q9HC98 313 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 TRIM39Q9HCM9 518 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 MRPL17Q9NRX2 175 aaKnown RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 CLN6Q9NWW5 311 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 FBXL12Q9NXK8 326 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 KCNE2Q9Y6J6 123 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 THSD7BQ9C0I4 1608 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 SH3D21A4FU49 640 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 SSX4O60224 188 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 IFNA14P01570 189 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 SOD2P04179 222 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 GABRR2P28476 465 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 BMPR1AP36894 532 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 HMGA2P52926 109 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 SLC5A12Q1EHB4 618 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 PLAG1Q6DJT9 500 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 C19orf48Q6RUI8 117 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 Q6ZVU0 165 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 TMPRSS11BQ86T26 416 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 RAVER1Q8IY67 606 aaKnown RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 SDHCQ99643 169 aaPredicted RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 TMEM121BQ9BXQ6 578 aaPredicted RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 CNOT2Q9NZN8 540 aaKnown RBP14.98□□□□□ -0.01
NUP88-207ENST00000573584 RAB23Q9ULC3 237 aa14.98□□□□□ -0.01
NUP88-207ENST00000573584 SAP18O00422 153 aaKnown RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 ZNF197O14709 1029 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 GASTP01350 101 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 CBLP22681 906 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 TCEA1P23193 301 aaKnown RBP14.97□□□□□ -0.01
NUP88-207ENST00000573584 CHMP24386 653 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 CNR2P34972 360 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 ETV3P41162 512 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 SLC15A1P46059 708 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 LIMS1P48059 325 aa14.97□□□□□ -0.01
NUP88-207ENST00000573584 DGKEP52429 567 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms