RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 GPR143P51810 404 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 PER3P56645 1201 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 POU4F1Q01851 419 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 C3AR1Q16581 482 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 GALNTL5Q7Z4T8 443 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 FGD2Q7Z6J4 655 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.94■□□□□ 0.3
CHD3-214ENST00000572579 ADAMTSL2Q86TH1 951 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 TICAM1Q8IUC6 712 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 SCUBE1Q8IWY4 988 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 LGI4Q8N135 537 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 ARMC10Q8N2F6 343 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 C17orf53Q8N3J3 647 aaPredicted RBP16.94■□□□□ 0.3
CHD3-214ENST00000572579 TBC1D19Q8N5T2 526 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 SLC5A8Q8N695 610 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 APCDD1LQ8NCL9 501 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 ADAMTS18Q8TE60 1221 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 PYROXD1Q8WU10 500 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 UBXN10Q96LJ8 280 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 GPR22Q99680 433 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 POPDC3Q9HBV1 291 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 PRDM9Q9NQV7 894 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 WHRNQ9P202 907 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 ZNF835Q9Y2P0 537 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 CCL21O00585 134 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 CCDC166P0CW27 439 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 GNAZP19086 355 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 ADORA2A-AS1P86434 159 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 DLG1Q12959 904 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 ZKSCAN8Q15776 578 aaPredicted RBP16.93■□□□□ 0.3
CHD3-214ENST00000572579 ADPRMQ3LIE5 342 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 SLC25A25Q6KCM7 469 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 TMIGD1Q6UXZ0 262 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 CYS1Q717R9 158 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 UBE3DQ7Z6J8 389 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 GPR137Q96N19 417 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 NT5DC2Q9H857 520 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 LRFN1Q9P244 771 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 RNF14Q9UBS8 474 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 SH3BGRL2Q9UJC5 107 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 PTBP2Q9UKA9 531 aaKnown RBP16.93■□□□□ 0.3
CHD3-214ENST00000572579 ENTPD4Q9Y227 616 aa16.93■□□□□ 0.3
CHD3-214ENST00000572579 ARHGAP10A1A4S6 786 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 FAM187AA6NFU0 413 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 TMEM200CA6NKL6 621 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 NPIPA5E9PKD4 350 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 CYR61O00622 381 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 ERI3O43414 337 aaKnown RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 PRKNO60260 465 aaPredicted RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 SLC19A2O60779 497 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 TRHRP34981 398 aaPredicted RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 HSPA7P48741 367 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 HSF1Q00613 529 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 OC90Q02509 493 aaPredicted RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 C2orf54Q08AI8 447 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 NIPAL1Q6NVV3 410 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 ZDHHC24Q6UX98 284 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 C16orf47Q6ZP98 133 aaPredicted RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 C3orf62Q6ZUJ4 267 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 NCCRP1Q6ZVX7 275 aaPredicted RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 THAP3Q8WTV1 239 aaPredicted RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 RBBP8Q99708 897 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 TINAGQ9UJW2 476 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 NPIPA1Q9UND3 350 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 PPIEQ9UNP9 301 aaKnown RBP16.92■□□□□ 0.3
CHD3-214ENST00000572579 ABCA12Q86UK0 2595 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 APCP25054 2843 aa16.92■□□□□ 0.3
CHD3-214ENST00000572579 CSMD2Q7Z408 3487 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 MYOCOSA0A1B0GUC4 107 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 NME2P1O60361 137 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 MYBL2P10244 700 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 CD46P15529 392 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 NME2P22392 152 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 EEF1DP29692 281 aaKnown RBP16.91■□□□□ 0.3
CHD3-214ENST00000572579 NR0B1P51843 470 aaKnown RBP16.91■□□□□ 0.3
CHD3-214ENST00000572579 PLA2G16P53816 162 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 DOC2AQ14183 400 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 MAPKAPK3Q16644 382 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 ABHD17CQ6PCB6 329 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 Q6ZPB1 254 aaPredicted RBP16.91■□□□□ 0.3
CHD3-214ENST00000572579 FRA10AC1Q70Z53 315 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 MRGPRGQ86SM5 289 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 GPSM1Q86YR5 675 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 CPSF7Q8N684 471 aaKnown RBP16.91■□□□□ 0.3
CHD3-214ENST00000572579 GAL3ST3Q96A11 431 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 MARVELD3Q96A59 401 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 WDR34Q96EX3 536 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 CSF3RQ99062 836 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 CPNE1Q99829 537 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 PRDM7Q9NQW5 492 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 DNAJC11Q9NVH1 559 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 NSMCE4AQ9NXX6 385 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 KCMF1Q9P0J7 381 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 PCNX1Q96RV3 2341 aa16.91■□□□□ 0.3
CHD3-214ENST00000572579 ADGRG4Q8IZF6 3080 aa16.9■□□□□ 0.3
CHD3-214ENST00000572579 URADA6NGE7 173 aa16.9■□□□□ 0.3
CHD3-214ENST00000572579 PRSS44E7EML9 344 aa16.9■□□□□ 0.3
CHD3-214ENST00000572579 EIF3HO15372 352 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHD3-214ENST00000572579 H2AFYO75367 372 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms