RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CTAGE15A4D2H0 777 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 G3V3Y1 287 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 ACOT7O00154 380 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 PRKNO60260 465 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 RNH1P13489 461 aaKnown RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 ZFP36L2P47974 494 aaKnown RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 RAB8AP61006 207 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 CDK16Q00536 496 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 CCNG2Q16589 344 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 B3GNT6Q6ZMB0 384 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 CTAGE6Q86UF2 777 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 LIX1LQ8IVB5 337 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 ARMC2Q8NEN0 867 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 ABHD11Q8NFV4 315 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 MYRIPQ8NFW9 859 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 OR2M7Q8NG81 312 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 EEF1AKMT1Q8WVE0 214 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 SREK1Q8WXA9 508 aaKnown RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 PDLIM2Q96JY6 352 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 SARGQ9BW04 601 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 TTTY12Q9BZ98 90 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 ZDHHC11Q9H8X9 412 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 LIN28AQ9H9Z2 209 aaKnown RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 PARVBQ9HBI1 364 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 ZFATQ9P243 1243 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 Q9UFV3 132 aa18.47■□□□□ 0.55
CCDC40-206ENST00000572083 TRMT6Q9UJA5 497 aaKnown RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 RPH3AQ9Y2J0 694 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-206ENST00000572083 TRBC2A0A5B9 178 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 FIGNL2A6NMB9 653 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 A8MVJ9 347 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 EIF3FO00303 357 aaPredicted RBP18.46■□□□□ 0.55
CCDC40-206ENST00000572083 PROM1O43490 865 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 C8GP07360 202 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 GLI4P10075 376 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 DNASE1P24855 282 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 KCNJ1P48048 391 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 DHX9Q08211 1270 aaKnown RBP18.46■□□□□ 0.55
CCDC40-206ENST00000572083 TRIP13Q15645 432 aaPredicted RBP18.46■□□□□ 0.55
CCDC40-206ENST00000572083 PHKG1Q16816 387 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 CATSPEREQ5SY80 951 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 RTL6Q6ICC9 239 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 NIPAL1Q6NVV3 410 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 ARSKQ6UWY0 536 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 KIAA0408Q6ZU52 694 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 OR4K1Q8NGD4 311 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 NT5CQ8TCD5 201 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 CREB3L4Q8TEY5 395 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 NCLNQ969V3 563 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 HAUS8Q9BT25 410 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 AARSD1Q9BTE6 412 aaKnown RBP18.46■□□□□ 0.55
CCDC40-206ENST00000572083 PNO1Q9NRX1 252 aaKnown RBP18.46■□□□□ 0.55
CCDC40-206ENST00000572083 HPF1Q9NWY4 346 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 COMMD10Q9Y6G5 202 aa18.46■□□□□ 0.55
CCDC40-206ENST00000572083 C4orf51C9J302 202 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 BCKDKO14874 412 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 OR2J2O76002 312 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 HAUS5O94927 633 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 PPP2R1BP30154 601 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ADH7P40394 386 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 VPS41P49754 854 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ADAM8P78325 824 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 SP140Q13342 867 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ANKRD22Q5VYY1 191 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 IL20RBQ6UXL0 311 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 WDR53Q7Z5U6 358 aaPredicted RBP18.45■□□□□ 0.54
CCDC40-206ENST00000572083 PALM2Q8IXS6 379 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ASB15Q8WXK1 588 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 VMP1Q96GC9 406 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 SNF8Q96H20 258 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ALPK1Q96QP1 1244 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 OR4K3Q96R72 315 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 NDNQ99608 321 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ZFP69BQ9UJL9 534 aa18.45■□□□□ 0.54
CCDC40-206ENST00000572083 YARS2Q9Y2Z4 477 aaKnown RBP18.45■□□□□ 0.54
CCDC40-206ENST00000572083 ZCWPW2A0A1B0GU75 182 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 OR6B1O95007 311 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 MAGEA5P43359 124 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 SCTRP47872 440 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 TERF2Q15554 542 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 LRRC8EQ6NSJ5 796 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 DRICH1Q6PGQ1 229 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-206ENST00000572083 Q71RC1 249 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-206ENST00000572083 STRA8Q7Z7C7 330 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 CAND1Q86VP6 1230 aaKnown RBP18.44■□□□□ 0.54
CCDC40-206ENST00000572083 SLC22A16Q86VW1 577 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 CA13Q8N1Q1 262 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 MYO1HQ8N1T3 1032 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 TXLNBQ8N3L3 684 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 TBC1D19Q8N5T2 526 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 SLCO2A1Q92959 643 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 TSNARE1Q96NA8 513 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 CCDC77Q9BR77 488 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 KLHL31Q9H511 634 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 RASSF1Q9NS23 344 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 C20orf96Q9NUD7 363 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-206ENST00000572083 CRIM1Q9NZV1 1036 aa18.44■□□□□ 0.54
CCDC40-206ENST00000572083 OR14I1A6ND48 311 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 TGFBR3LH3BV60 316 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 FOSL1P15407 271 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms