RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
PRPF8-202ENST00000571346 GPRC5BQ9NZH0 403 aa12.81□□□□□ -0.36
PRPF8-202ENST00000571346 CROCCQ5TZA2 2017 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 A0A088AWK7 358 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 ANKDD1BA6NHY2 528 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 SAGE2PA6NJ88 616 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 A8MUA0 341 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 SUPT3HB4E1H0 165 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 FAM227AF5H4B4 570 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 TAPBPO15533 448 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 SUPT3HO75486 399 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 STK16O75716 305 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 UNC5CO95185 931 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 CLDN1O95832 211 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 CRYABP02511 175 aaKnown RBP12.8□□□□□ -0.36
PRPF8-202ENST00000571346 C1QAP02745 245 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 ZNF10P21506 573 aaPredicted RBP12.8□□□□□ -0.36
PRPF8-202ENST00000571346 TDGF1P3P51864 188 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 PLA2G16P53816 162 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 SLC7A5Q01650 507 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 GRTP1Q5TC63 336 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 SULT1C3Q6IMI6 304 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 TRIM40Q6P9F5 258 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 TBC1D1Q86TI0 1168 aaPredicted RBP12.8□□□□□ -0.36
PRPF8-202ENST00000571346 FAM47BQ8NA70 645 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 PDPRQ8NCN5 879 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 SIGLEC12Q96PQ1 595 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 NPAS2Q99743 824 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 CAPS2Q9BXY5 557 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 HES7Q9BYE0 225 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 REXO4Q9GZR2 422 aaKnown RBP12.8□□□□□ -0.36
PRPF8-202ENST00000571346 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
PRPF8-202ENST00000571346 POLEQ07864 2286 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 CELSR2Q9HCU4 2923 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 ZGRF1Q86YA3 2104 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 TCRBV16S1A1N1A0A5B0 115 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 B3GALT2O43825 422 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 MYO1DO94832 1006 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 SLC35E2BP0CK96 405 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 CD46P15529 392 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 TFEBP19484 476 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 CERS1P27544 350 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 COL8A1P27658 744 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 GSTM2P28161 218 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 HPDP32754 393 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-202ENST00000571346 BMPR2Q13873 1038 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 UAP1Q16222 522 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-202ENST00000571346 ZNF324BQ6AW86 544 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-202ENST00000571346 H3F3CQ6NXT2 135 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 LRRC70Q7Z2Q7 622 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 KIAA1191Q96A73 305 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 MS4A6EQ96DS6 147 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 PTCD3Q96EY7 689 aaKnown RBP12.79□□□□□ -0.36
PRPF8-202ENST00000571346 EFCAB11Q9BUY7 163 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 TSPAN10Q9H1Z9 355 aaPredicted RBP12.79□□□□□ -0.36
PRPF8-202ENST00000571346 NECTIN3Q9NQS3 549 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 SEC14L3Q9UDX4 400 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 SH3BGRL2Q9UJC5 107 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 ASB1Q9Y576 335 aa12.79□□□□□ -0.36
PRPF8-202ENST00000571346 IGKV3D-11A0A0A0MRZ8 115 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 TRGV8A0A0C4DH27 118 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 LRIT2A6NDA9 550 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 WIPF3A6NGB9 483 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 UBXN8O00124 270 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 ZG16O60844 167 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 CLEC3AO75596 197 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 SMIM10L1P0DMW3 83 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 MST1P26927 711 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 TPP2P29144 1249 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 EEF1DP29692 281 aaKnown RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 RAB38P57729 211 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 IRF8Q02556 426 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 NAB1Q13506 487 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 DOC2AQ14183 400 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 PAGE2BQ5JRK9 111 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 CDKL4Q5MAI5 379 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 ZNF787Q6DD87 383 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 SPINK14Q6IE38 97 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 CYS1Q717R9 158 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 ZNF572Q7Z3I7 529 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 VN1R5Q7Z5H4 357 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 CLNKQ7Z7G1 428 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 TMEM178AQ8NBL3 297 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 MDS2Q8NDY4 140 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 OR2L5Q8NG80 312 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 ELP5Q8TE02 316 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 SMIM10Q96HG1 83 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 UBXN10Q96LJ8 280 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 PITHD1Q9GZP4 211 aaPredicted RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 EHD1Q9H4M9 534 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 CDCP1Q9H5V8 836 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 CLK4Q9HAZ1 481 aaKnown RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 PRTFDC1Q9NRG1 225 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 PNO1Q9NRX1 252 aaKnown RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 LRFN1Q9P244 771 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 MRPS33Q9Y291 106 aaKnown RBP12.78□□□□□ -0.36
PRPF8-202ENST00000571346 MMACHCQ9Y4U1 282 aa12.78□□□□□ -0.36
PRPF8-202ENST00000571346 DIDO1Q9BTC0 2240 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms