RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 TINAGQ9UJW2 476 aa12.89□□□□□ -0.35
PSMB6-202ENST00000571309 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
PSMB6-202ENST00000571309 MMACHCQ9Y4U1 282 aa12.89□□□□□ -0.35
PSMB6-202ENST00000571309 FBN2P35556 2912 aa12.89□□□□□ -0.35
PSMB6-202ENST00000571309 USP27XA6NNY8 438 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 ASNA1O43681 348 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 H2AFYO75367 372 aaKnown RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 WDR47O94967 919 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 WISP3O95389 354 aaPredicted RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 GSTM2P28161 218 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 PTGER4P35408 488 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 GDF5P43026 501 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 BTN3A2P78410 334 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 ILF2Q12905 390 aaKnown RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 TERF2Q15554 542 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 C18orf21Q32NC0 220 aaPredicted RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 TMIGD1Q6UXZ0 262 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 FRA10AC1Q70Z53 315 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 APCDD1LQ8NCL9 501 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 TTLQ8NG68 377 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 GAL3ST3Q96A11 431 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 VPS39Q96JC1 886 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 SEC16BQ96JE7 1060 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 DERL2Q9GZP9 239 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 NT5DC2Q9H857 520 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 GPAMQ9HCL2 828 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 PPIEQ9UNP9 301 aaKnown RBP12.88□□□□□ -0.35
PSMB6-202ENST00000571309 MEMO1Q9Y316 297 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 GTF3C1Q12789 2109 aa12.88□□□□□ -0.35
PSMB6-202ENST00000571309 LRIT2A6NDA9 550 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 A8MUA0 341 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 EFCAB8A8MWE9 144 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 FCHO1O14526 889 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 ZNF24P17028 368 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 GGT5P36269 586 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 SMSP52788 366 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 GNG11P61952 73 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 POU4F1Q01851 419 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 RUNX2Q13950 521 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 TGFBIQ15582 683 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 CHERPQ8IWX8 916 aaKnown RBP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 GHDCQ8N2G8 530 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 B3GNT7Q8NFL0 401 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 TMEM125Q96AQ2 219 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 MS4A6EQ96DS6 147 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 PDLIM2Q96JY6 352 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 FAR2Q96K12 515 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 NAPGQ99747 312 aaPredicted RBP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 CAPS2Q9BXY5 557 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
PSMB6-202ENST00000571309 SMYD2Q9NRG4 433 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 GPRC5BQ9NZH0 403 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 CLDN16Q9Y5I7 305 aa12.87□□□□□ -0.35
PSMB6-202ENST00000571309 TRBV11-1A0A0K0K1C0 115 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 TAPBPO15533 448 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 ERI3O43414 337 aaKnown RBP12.86□□□□□ -0.35
PSMB6-202ENST00000571309 CLEC3AO75596 197 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 MYO1DO94832 1006 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 TBX6O95947 436 aaPredicted RBP12.86□□□□□ -0.35
PSMB6-202ENST00000571309 CLCN2P51788 898 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 HSD17B7P56937 341 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 RAB38P57729 211 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 ADPRMQ3LIE5 342 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 CDKL4Q5MAI5 379 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 FGD2Q7Z6J4 655 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 ZBED8Q8IZ13 594 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 TCAIMQ8N3R3 496 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 POGLUT1Q8NBL1 392 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 TMEM79Q9BSE2 394 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 PRTFDC1Q9NRG1 225 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 ZNF223Q9UK11 482 aaPredicted RBP12.86□□□□□ -0.35
PSMB6-202ENST00000571309 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
PSMB6-202ENST00000571309 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
PSMB6-202ENST00000571309 SNX24Q9Y343 169 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 ASB1Q9Y576 335 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 PDZD2O15018 2839 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
PSMB6-202ENST00000571309 OTOGQ6ZRI0 2925 aa12.85□□□□□ -0.35
PSMB6-202ENST00000571309 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
PSMB6-202ENST00000571309 A0A088AWK7 358 aa12.85□□□□□ -0.35
PSMB6-202ENST00000571309 A0A0G2JN53 185 aa12.85□□□□□ -0.35
PSMB6-202ENST00000571309 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
PSMB6-202ENST00000571309 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
PSMB6-202ENST00000571309 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
PSMB6-202ENST00000571309 CLDN4O14493 209 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms