RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HSF2BPO75031 334 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 JRKO75564 520 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 TBX18O95935 607 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 APODP05090 189 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 CLEC3BP05452 202 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 CYP11B1P15538 503 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 IL7RP16871 459 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 UGT1A1P22309 533 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 TNFRSF4P43489 277 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 GLIPR1P48060 266 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 RGS7P49802 495 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 CCR9P51686 369 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 VCPP55072 806 aaKnown RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 F2RL1P55085 397 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 DAOAP59103 153 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ISL1P61371 349 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ZBED6P86452 979 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 GAGE5Q13069 117 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 GAGE6Q13070 117 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 MAD2L1Q13257 205 aaPredicted RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 RBM39Q14498 530 aaKnown RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 PON2Q15165 354 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ANGPT1Q15389 498 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 MYLK3Q32MK0 819 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ZSCAN23Q3MJ62 389 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 MPPE1Q53F39 396 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 PMF1Q6P1K2 205 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ZNF704Q6ZNC4 412 aaPredicted RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 C11orf57Q6ZUT1 292 aaPredicted RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 TRMT11Q7Z4G4 463 aaKnown RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 TMEM110Q86TL2 294 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 SLC47A2Q86VL8 602 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ERICH1Q86X53 443 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 FAM71AQ8IYT1 594 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 SPEM1Q8N4L4 309 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 C1orf131Q8NDD1 294 aaKnown RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 ACVR1CQ8NER5 493 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ZNF397Q8NF99 534 aaPredicted RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 DDI1Q8WTU0 396 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 AZIN2Q96A70 460 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ARHGEF26Q96DR7 871 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 SERPINB11Q96P15 392 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ERGIC2Q96RQ1 377 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 NEURL2Q9BR09 285 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 NUP58Q9BVL2 599 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 BBS2Q9BXC9 721 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 ULBP1Q9BZM6 244 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 LINC00597Q9H2U6 94 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 NMUR1Q9HB89 426 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 POPDC2Q9HBU9 364 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 SIX2Q9NPC8 291 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 SPHK2Q9NRA0 654 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 CNOT8Q9UFF9 292 aaKnown RBP3.8□□□□□ -1.8
NUP88-202ENST00000570937 RASAL2Q9UJF2 1139 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 FBXL2Q9UKC9 423 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 STAP1Q9ULZ2 295 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 MYO10Q9HD67 2058 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 WDFY4Q6ZS81 3184 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 ZCWPW2A0A1B0GU75 182 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 DAB1O75553 588 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 GFPT2O94808 682 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 IPO7O95373 1038 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 APOEP02649 317 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 HMBSP08397 361 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 SPARCP09486 303 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 TPM1P09493 284 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 SP9P0CG40 484 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 FAM106CPP0CH98 169 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 FERP16591 822 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 ZNF18P17022 549 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 PSMA4P25789 261 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 HOXA6P31267 233 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 CCR1P32246 355 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 TIMP3P35625 211 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 NSFP46459 744 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 RPL34P49207 117 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 HOXA1P49639 335 aaPredicted RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 TERF1P54274 439 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 CLDN20P56880 219 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 POLR2FP61218 127 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 CDR2Q01850 454 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 CSTF1Q05048 431 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 FRG1Q14331 258 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 ADIPOQQ15848 244 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 TMEM35AQ53FP2 167 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 EOGTQ5NDL2 527 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 CCNYL2Q5T2Q4 361 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 MPP7Q5T2T1 576 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 PMS2CLQ68D20 193 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 OR6B2Q6IFH4 312 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 PAPD4Q6PIY7 484 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 ARCQ7LC44 396 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 SCD5Q86SK9 330 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 GPR180Q86V85 440 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 VPS36Q86VN1 386 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 TMPRSS12Q86WS5 348 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 TMEM25Q86YD3 366 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 BBS7Q8IWZ6 715 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms