RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SPRP35270 261 aaPredicted RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLC26A5P58743 744 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 RAB10P61026 200 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 HYAL2Q12891 473 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZKSCAN8Q15776 578 aaPredicted RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CDKL4Q5MAI5 379 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 SULT1C3Q6IMI6 304 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 QSOX2Q6ZRP7 698 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 RAPH1Q70E73 1250 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 MAMDC2Q7Z304 686 aaPredicted RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CRLF3Q8IUI8 442 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 PPM1NQ8N819 430 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 SNX31Q8N9S9 440 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 ARMC2Q8NEN0 867 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 FBXO25Q8TCJ0 367 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CREB3L4Q8TEY5 395 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 NR4A3Q92570 626 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 EXT2Q93063 718 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 GAL3ST3Q96A11 431 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 SEC16BQ96JE7 1060 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 FAR2Q96K12 515 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 PTCHD1Q96NR3 888 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 TAAR6Q96RI8 345 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 UTP23Q9BRU9 249 aaKnown RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 TMEM79Q9BSE2 394 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 RHBGQ9H310 441 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 KLHL31Q9H511 634 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 DNAJC11Q9NVH1 559 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CD274Q9NZQ7 290 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 RNF112Q9ULX5 631 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 POLEQ07864 2286 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 ICE1Q9Y2F5 2266 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CLGNO14967 610 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 LRRTM2O43300 516 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 ERI3O43414 337 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 DNAJB6O75190 326 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 STK16O75716 305 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 MAOAP21397 527 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 GGT5P36269 586 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 MAGEA4P43358 317 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 HSPA7P48741 367 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 GPX6P59796 221 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 BTN3A2P78410 334 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 NAB1Q13506 487 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 TUBA3CQ13748 450 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 OR4D1Q15615 310 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 PDK4Q16654 411 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 KBTBD12Q3ZCT8 623 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZNF766Q5HY98 468 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 GRTP1Q5TC63 336 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZNF324BQ6AW86 544 aaPredicted RBP11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 H3F3CQ6NXT2 135 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 TUBA3EQ6PEY2 450 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 LGI4Q8N135 537 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 PDPRQ8NCN5 879 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 PITHD1Q9GZP4 211 aaPredicted RBP11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 EHD1Q9H4M9 534 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 PRM3Q9NNZ6 103 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
CTDNEP1-205ENST00000570828 ANKDD1BA6NHY2 528 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 SAGE2PA6NJ88 616 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 GABRR3A8MPY1 467 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 C4orf51C9J302 202 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 TAPBPO15533 448 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 CLEC3AO75596 197 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 STSP08842 583 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 SMIM10L1P0DMW3 83 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 HNRNPH1P31943 449 aaKnown RBP11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 TDGF1P3P51864 188 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 KCNK10P57789 538 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 BTG2P78543 158 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 OC90Q02509 493 aaPredicted RBP11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 OR1C1Q15619 314 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 TUSC1Q2TAM9 212 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 FBXO48Q5FWF7 155 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 XKR6Q5GH73 641 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 PAGE2BQ5JRK9 111 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 C8orf74Q6P047 294 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 TRIM40Q6P9F5 258 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZDHHC24Q6UX98 284 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 GFRALQ6UXV0 394 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZNF572Q7Z3I7 529 aaPredicted RBP11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 TBC1D1Q86TI0 1168 aaPredicted RBP11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 CA13Q8N1Q1 262 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 HORMAD2Q8N7B1 307 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 DNAJB8Q8NHS0 232 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 ADAMTS18Q8TE60 1221 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 FBF1Q8TES7 1133 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 KIAA1191Q96A73 305 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 PTCD3Q96EY7 689 aaKnown RBP11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 SMIM10Q96HG1 83 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 UBXN10Q96LJ8 280 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 EFCAB11Q9BUY7 163 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 ALG9Q9H6U8 611 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 NT5DC2Q9H857 520 aa11.59□□□□□ -0.55
CTDNEP1-205ENST00000570828 COPS7BQ9H9Q2 264 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms