RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
SPG7-221ENST00000569720 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 SLC17A6Q9P2U8 582 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 TINAGQ9UJW2 476 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 CHMP2BQ9UQN3 213 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 ZNF835Q9Y2P0 537 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 KCNE2Q9Y6J6 123 aa12.31□□□□□ -0.44
SPG7-221ENST00000569720 SAGE2PA6NJ88 616 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 FCHO1O14526 889 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 ASNA1O43681 348 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 MAN1A2O60476 641 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 SLC25A12O75746 678 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 NEURL1O76050 574 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 ZNF24P17028 368 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 SAT1P21673 171 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 HNF4AP41235 474 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 RAB8AP61006 207 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 REEP5Q00765 189 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 RBBP5Q15291 538 aaKnown RBP12.3□□□□□ -0.44
SPG7-221ENST00000569720 HP1BP3Q5SSJ5 553 aaPredicted RBP12.3□□□□□ -0.44
SPG7-221ENST00000569720 ZDHHC24Q6UX98 284 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 Q6ZPB1 254 aaPredicted RBP12.3□□□□□ -0.44
SPG7-221ENST00000569720 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
SPG7-221ENST00000569720 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.3□□□□□ -0.44
SPG7-221ENST00000569720 TMPRSS11BQ86T26 416 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 EID3Q8N140 333 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 OLFM1Q99784 485 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 EGFL8Q99944 293 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 DEFB126Q9BYW3 111 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 SLC6A16Q9GZN6 736 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 SPNS1Q9H2V7 528 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 RHBGQ9H310 441 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 ARGLU1Q9NWB6 273 aaPredicted RBP12.3□□□□□ -0.44
SPG7-221ENST00000569720 ZFATQ9P243 1243 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 CACNA1CQ13936 2221 aa12.3□□□□□ -0.44
SPG7-221ENST00000569720 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 NME2P1O60361 137 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 DNAJB6O75190 326 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 H2AFYO75367 372 aaKnown RBP12.29□□□□□ -0.44
SPG7-221ENST00000569720 WISP2O76076 250 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 CLDN14O95500 239 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 B3GALT4O96024 378 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 SERPINA6P08185 405 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 SNRPB2P08579 225 aaKnown RBP12.29□□□□□ -0.44
SPG7-221ENST00000569720 ZNF37AP17032 561 aaPredicted RBP12.29□□□□□ -0.44
SPG7-221ENST00000569720 NME2P22392 152 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 TPP2P29144 1249 aaPredicted RBP12.29□□□□□ -0.44
SPG7-221ENST00000569720 PHBP35232 272 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 HNMTP50135 292 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 PGGT1BP53609 377 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 STXBP1P61764 594 aaKnown RBP12.29□□□□□ -0.44
SPG7-221ENST00000569720 BTG2P78543 158 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 ADORA2A-AS1P86434 159 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 SBSNQ6UWP8 590 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 FRA10AC1Q70Z53 315 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 KIF2BQ8N4N8 673 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 ANKRD53Q8N9V6 530 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 POGLUT1Q8NBL1 392 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 ANKRD7Q92527 254 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 FAR2Q96K12 515 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 PHF12Q96QT6 1004 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 NFU1Q9UMS0 254 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 SLC22A14Q9Y267 594 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 MEMO1Q9Y316 297 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 TEX264Q9Y6I9 313 aa12.29□□□□□ -0.44
SPG7-221ENST00000569720 A0A088AWK7 358 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 A8MUA0 341 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 PRRG2O14669 202 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 MAOAP21397 527 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 ZNF10P21506 573 aaPredicted RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 ECHS1P30084 290 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 TRHRP34981 398 aaPredicted RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 MAGEA4P43358 317 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 HLCSP50747 726 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 CLCN2P51788 898 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 MLF1P58340 268 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 MRPS25P82663 173 aaKnown RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 CDKL1Q00532 357 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 MGAT5Q09328 741 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 PDIA2Q13087 525 aaKnown RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 PPP1R3AQ16821 1122 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 TOR1AIP1Q5JTV8 583 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 STEAP4Q687X5 459 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 TRMT10BQ6PF06 316 aaKnown RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 ADAMTSL2Q86TH1 951 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 TTLQ8NG68 377 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 ADAMTS18Q8TE60 1221 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 CAVIN3Q969G5 261 aa12.28□□□□□ -0.44
SPG7-221ENST00000569720 MTFMTQ96DP5 389 aaKnown RBP12.28□□□□□ -0.44
SPG7-221ENST00000569720 VPS39Q96JC1 886 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms