RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 C8orf89P0DMQ9 161 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 RNH1P13489 461 aaKnown RBP12.1□□□□□ -0.47
CDT1-203ENST00000569140 IMPDH1P20839 514 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 JAK1P23458 1154 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 CERS1P27544 350 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 HMOX2P30519 316 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 MTTPP55157 894 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 TRAF3Q13114 568 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 AP5B1Q2VPB7 878 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 TMEM35AQ53FP2 167 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 KHDRBS2Q5VWX1 349 aaKnown RBP12.1□□□□□ -0.47
CDT1-203ENST00000569140 LETMD1Q6P1Q0 360 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 SH2D5Q6ZV89 423 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 GPRIN3Q6ZVF9 776 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 CA13Q8N1Q1 262 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 TMEM102Q8N9M5 508 aaPredicted RBP12.1□□□□□ -0.47
CDT1-203ENST00000569140 BANPQ8N9N5 519 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 L3MBTL4Q8NA19 623 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 FAM47BQ8NA70 645 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
CDT1-203ENST00000569140 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 TBC1D20Q96BZ9 403 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
CDT1-203ENST00000569140 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 FAM111AQ96PZ2 611 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 NTMT1Q9BV86 223 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 TMEM109Q9BVC6 243 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 TGIF2Q9GZN2 237 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 VN1R1Q9GZP7 353 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 SLC17A7Q9P2U7 560 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 SNX6Q9UNH7 406 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 STK38LQ9Y2H1 464 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 CCDC88CQ9P219 2028 aa12.1□□□□□ -0.47
CDT1-203ENST00000569140 PTPRQQ9UMZ3 2332 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 EPG5Q9HCE0 2579 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 H0YIV9 168 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 PPP6CO00743 305 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 FHP07954 510 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SMIM10L1P0DMW3 83 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 ITGA3P26006 1051 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 PIK3CBP42338 1070 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 NAGLUP54802 743 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 PCDH1Q08174 1060 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 E2F2Q14209 437 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 DCAF10Q5QP82 559 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 IRAK1BP1Q5VVH5 260 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 FAM219BQ5XKK7 198 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 ABHD17CQ6PCB6 329 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 KIRREL2Q6UWL6 708 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 CROCCP2Q86T23 111 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 CDYL2Q8N8U2 506 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 EXD3Q8N9H8 876 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 C9orf43Q8TAL5 461 aaPredicted RBP12.09□□□□□ -0.47
CDT1-203ENST00000569140 TCP10LQ8TDR4 215 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SELENOMQ8WWX9 145 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 RGMAQ96B86 450 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 L3HYPDHQ96EM0 354 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SMIM10Q96HG1 83 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 BBC3Q96PG8 261 aaPredicted RBP12.09□□□□□ -0.47
CDT1-203ENST00000569140 OR1F2PQ96R84 312 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SERINC2Q96SA4 455 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 MESP1Q9BRJ9 268 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SLC25A23Q9BV35 468 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SORBS1Q9BX66 1292 aaKnown RBP12.09□□□□□ -0.47
CDT1-203ENST00000569140 C1QTNF3Q9BXJ4 246 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SHCBP1LQ9BZQ2 653 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 ROGDIQ9GZN7 287 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 ADNPQ9H2P0 1102 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 MID1IP1Q9NPA3 183 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 ZNF71Q9NQZ8 489 aaPredicted RBP12.09□□□□□ -0.47
CDT1-203ENST00000569140 MKS1Q9NXB0 559 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 SENP1Q9P0U3 644 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 C19orf25Q9UFG5 118 aaPredicted RBP12.09□□□□□ -0.47
CDT1-203ENST00000569140 TRPS1Q9UHF7 1281 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 PLLPQ9Y342 182 aa12.09□□□□□ -0.47
CDT1-203ENST00000569140 DSPP15924 2871 aaKnown RBP12.08□□□□□ -0.47
CDT1-203ENST00000569140 NSG1A0A0A6YYJ2 146 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 IGHV3-20A0A0C4DH32 117 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 A0A1B0GTL3 188 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 FAM227AF5H4B4 570 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 TBX6O95947 436 aaPredicted RBP12.08□□□□□ -0.48
CDT1-203ENST00000569140 PRB1P04280 392 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 SFTPCP11686 197 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 CREB1P16220 341 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 NR1D1P20393 614 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 IL10P22301 178 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 PTX3P26022 381 aaPredicted RBP12.08□□□□□ -0.48
CDT1-203ENST00000569140 RAB38P57729 211 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 ACTN3Q08043 901 aaPredicted RBP12.08□□□□□ -0.48
CDT1-203ENST00000569140 ASPHQ12797 758 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 LCP2Q13094 533 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 RUNX2Q13950 521 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 ABRAXAS2Q15018 415 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 NSDHLQ15738 373 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 ADPRMQ3LIE5 342 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 GGTA1PQ4G0N0 100 aa12.08□□□□□ -0.48
CDT1-203ENST00000569140 LIPMQ5VYY2 423 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms