RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 FRG2BQ96QU4 278 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 OR1F2PQ96R84 312 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 NPLQ9BXD5 320 aaPredicted RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 TRIM55Q9BYV6 548 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 HCN3Q9P1Z3 774 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 SLC17A7Q9P2U7 560 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CLDN16Q9Y5I7 305 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 ACTL7BQ9Y614 415 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 COL6A6A6NMZ7 2263 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 SCN2AQ99250 2005 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 A0A0G2JN53 185 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 MAGEB17A8MXT2 336 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 IDSB3KWA1 339 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 AGPSO00116 658 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 ATXN7O15265 892 aaPredicted RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 RGS16O15492 202 aaPredicted RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 SPAG7O75391 227 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 CEACAM4O75871 244 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 TGFB1P01137 390 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 IGHEP01854 428 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 IL10P22301 178 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 OTX2P32243 289 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 XCR1P46094 333 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 NEK2P51955 445 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 NAGLUP54802 743 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 NAA20P61599 178 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 RPS13P62277 151 aaKnown RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 SKP1P63208 163 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 OLR1P78380 273 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 RHAGQ02094 409 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 C19orf57Q0VDD7 668 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 LCP2Q13094 533 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 CUL3Q13618 768 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 MPP2Q14168 576 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 CASP8Q14790 479 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 TMEM35AQ53FP2 167 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 KHDRBS2Q5VWX1 349 aaKnown RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 CPZQ66K79 652 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 FRMD7Q6ZUT3 714 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 C10orf107Q8IVU9 208 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 CA13Q8N1Q1 262 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 PLPP5Q8NEB5 264 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 TCP10LQ8TDR4 215 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 AGAP11Q8TF27 550 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 TBC1D20Q96BZ9 403 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 MAGEB10Q96LZ2 347 aaPredicted RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 FAM111AQ96PZ2 611 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 SMC6Q96SB8 1091 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 GATA5Q9BWX5 397 aaPredicted RBP11.71□□□□□ -0.53
RNF40-211ENST00000567365 VN1R1Q9GZP7 353 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 OR51B5Q9H339 312 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 P4HTMQ9NXG6 502 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 KCMF1Q9P0J7 381 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 TRPS1Q9UHF7 1281 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 C3orf18Q9UK00 162 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 MAN2B2Q9Y2E5 1009 aa11.71□□□□□ -0.53
RNF40-211ENST00000567365 OR2W5A6NFC9 320 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 RTCAO00442 366 aaKnown RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 PLPP1O14494 284 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 PCDH17O14917 1159 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 OR4F21O95013 312 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 SEMA3DO95025 777 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 ESRRBO95718 433 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 MLYCDO95822 493 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 FHP07954 510 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 DHRS4L1P0CG22 281 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 PCNAP12004 261 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 ATP5A1P25705 553 aaKnown RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 PTX3P26022 381 aaPredicted RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 CERS1P27544 350 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 HPDP32754 393 aaPredicted RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 BSGP35613 385 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TSFMP43897 325 aaKnown RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 CCR10P46092 362 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 PLA2G16P53816 162 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 EMP2P54851 167 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 MTTPP55157 894 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 PKNOX1P55347 436 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 SOX8P57073 446 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 BTN3A2P78410 334 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TUBB8Q3ZCM7 444 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TCHHL1Q5QJ38 904 aaPredicted RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 LIPMQ5VYY2 423 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 MRM1Q6IN84 353 aaKnown RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 TRIM40Q6P9F5 258 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 ATG14Q6ZNE5 492 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 GPRIN3Q6ZVF9 776 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 CHSY3Q70JA7 882 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 MYLK4Q86YV6 388 aaPredicted RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 PRSS58Q8IYP2 241 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 ZNF843Q8N446 348 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TMEM102Q8N9M5 508 aaPredicted RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 SRFBP1Q8NEF9 429 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms