RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 UQCRC2P22695 453 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 HOXD10P28358 340 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 SFTPDP35247 375 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 GNL1P36915 607 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 NUP62P37198 522 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 SYKP43405 635 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 NUMBP49757 651 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CLDN15P56746 228 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 EIF3EP60228 445 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CX3CL1P78423 397 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ZXDBP98169 803 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 FGL1Q08830 312 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ST3GAL1Q11201 340 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 DNAJC3Q13217 504 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 NFATC2Q13469 925 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 IDI1Q13907 227 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ARHGAP19Q14CB8 494 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 DPYSL2Q16555 572 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 PHKG1Q16816 387 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF284Q2VY69 593 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 TDRD12Q587J7 1177 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 PPP6R3Q5H9R7 873 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ASPHD1Q5U4P2 390 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 PRAMEF17Q5VTA0 474 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 IGFL4Q6B9Z1 124 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ZSCAN25Q6NSZ9 544 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 SYT10Q6XYQ8 523 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 KDM7AQ6ZMT4 941 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ANO5Q75V66 913 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 C16orf62Q7Z3J2 963 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 YRDCQ86U90 279 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM131BQ86XD5 332 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ADGRG3Q86Y34 549 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 OFCC1Q8IZS5 231 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CRYBG2Q8N1P7 616 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 AADATQ8N5Z0 425 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 OR52J3Q8NH60 311 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 IL17DQ8TAD2 202 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 GOLGA5Q8TBA6 731 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC22A8Q8TCC7 542 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 GIPC3Q8TF64 312 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 RAB39BQ96DA2 213 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 HPDLQ96IR7 371 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 RBM41Q96IZ5 413 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM84BQ96KN1 310 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF48Q96MX3 618 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 GPR137Q96N19 417 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 DEFB118Q96PH6 123 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CSF3RQ99062 836 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 KRT12Q99456 494 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 NDNQ99608 321 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CBWD1Q9BRT8 395 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 URM1Q9BTM9 101 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 NUP58Q9BVL2 599 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 MRPL13Q9BYD1 178 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 PKIBQ9C010 78 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 EHD1Q9H4M9 534 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 MAP6D1Q9H9H5 199 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 DDX28Q9NUL7 540 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ASB6Q9NWX5 421 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 SERGEFQ9UGK8 458 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 BCAP29Q9UHQ4 241 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 MRTO4Q9UKD2 239 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ADAM21Q9UKJ8 722 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 AGO2Q9UKV8 859 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 TRAF3IP3Q9Y228 551 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 MRPS2Q9Y399 296 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 OR10H1Q9Y4A9 318 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 YIPF1Q9Y548 306 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ZHX2Q9Y6X8 837 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 PTPRCP08575 1304 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 IFT140Q96RY7 1462 aa3.09□□□□□ -1.92
HERPUD1-211ENST00000566550 SMARCA4P51532 1647 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 A0A1W2PP11 408 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 METTL21EPA6NDL7 271 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 OR5K3A6NET4 321 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 OR52A4PA6NMU1 304 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 E9PI62 339 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 KIF2AO00139 706 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SDHDO14521 159 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF197O14709 1029 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MGST3O14880 152 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ARPC2O15144 300 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 POLR3GO15318 223 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PRKRAO75569 313 aaKnown RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 NPPAP01160 153 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 GSTA2P09210 222 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PABPC4LP0CB38 370 aaKnown RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PNMTP11086 282 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 F3P13726 295 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 CBLP22681 906 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PTBP1P26599 531 aaKnown RBP eCLIP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PTGS2P35354 604 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MAGEA1P43355 309 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MAGEA11P43364 429 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 CD151P48509 253 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 FNTAP49354 379 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 VAMP7P51809 220 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms