RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TMEM184CQ9NVA4 438 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 RBMX2Q9Y388 322 aaKnown RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 DNAH12Q6ZR08 3092 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 ANAPC1Q9H1A4 1944 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 IQCMA0A1B0GVH7 501 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 SMAD6O43541 496 aaKnown RBP20.71■□□□□ 0.91
SPSB3-208ENST00000566339 GREM1O60565 184 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 C1QCP02747 245 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 CSTF2P33240 577 aaKnown RBP eCLIP20.71■□□□□ 0.91
SPSB3-208ENST00000566339 CRISP1P54107 249 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 EEF1A2Q05639 463 aaKnown RBP20.71■□□□□ 0.91
SPSB3-208ENST00000566339 LRRC26Q2I0M4 334 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 ERAP2Q6P179 960 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 TSPAN33Q86UF1 283 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 RAB43Q86YS6 212 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 SKA2Q8WVK7 121 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-208ENST00000566339 NIPSNAP1Q9BPW8 284 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 TMEM245Q9H330 911 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 SLC25A19Q9HC21 320 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 ACER3Q9NUN7 267 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 ANGPT4Q9Y264 503 aa20.71■□□□□ 0.91
SPSB3-208ENST00000566339 HMX3A6NHT5 357 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 ARHGAP33O14559 1287 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 SCO2O43819 266 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 OLFM2O95897 454 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 LGI1O95970 557 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 ADAP00813 363 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 TNFSF8P32971 234 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 RORCP51449 518 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 PTSQ03393 145 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 PDE7AQ13946 482 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 PTGES3Q15185 160 aaKnown RBP20.7■□□□□ 0.9
SPSB3-208ENST00000566339 TAF12Q16514 161 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 TSTQ16762 297 aaKnown RBP20.7■□□□□ 0.9
SPSB3-208ENST00000566339 PRSS55Q6UWB4 352 aaPredicted RBP20.7■□□□□ 0.9
SPSB3-208ENST00000566339 NPAS4Q8IUM7 802 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 SUV39H2Q9H5I1 410 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 C1GALT1Q9NS00 363 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 NFKBIL1Q9UBC1 381 aaPredicted RBP20.7■□□□□ 0.9
SPSB3-208ENST00000566339 KCND3Q9UK17 655 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 N6AMT1Q9Y5N5 214 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 DSPPQ9NZW4 1301 aa20.7■□□□□ 0.9
SPSB3-208ENST00000566339 FADS2P1A8MWK0 482 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 H3BQ06 376 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 FOXE1O00358 373 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 PCDH7O60245 1069 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ZNF821O75541 412 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ABLIM3O94929 683 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ARAFP10398 606 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 TCEA1P23193 301 aaKnown RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ITGB7P26010 798 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 NR4A2P43354 598 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 SPINT3P49223 89 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 NUDT6P53370 316 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 PCBP3P57721 371 aaKnown RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 DCDC1P59894 354 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 DMC1Q14565 340 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 FRMPD2BQ6IN97 320 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 APCDD1Q8J025 514 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 OR6K2Q8NGY2 324 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 OR56A3Q8NH54 315 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 FAM129BQ96TA1 746 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 SGK2Q9HBY8 427 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 AMBNQ9NP70 447 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 RLIMQ9NVW2 624 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 TBC1D24Q9ULP9 559 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 TMEM98Q9Y2Y6 226 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 CEP290O15078 2479 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 SEC14L5O43304 696 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 GPR37L1O60883 481 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 GADD45GO95257 159 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ZNF30P17039 623 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 OR1D2P34982 312 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 CRATP43155 626 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ZNF763Q0D2J5 394 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 MPPE1Q53F39 396 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ATAD3CQ5T2N8 411 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ZNF517Q6ZMY9 492 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 PTCHD4Q6ZW05 846 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 VN1R5Q7Z5H4 357 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 BBS7Q8IWZ6 715 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 CELF2-AS1Q8N7Q2 184 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ZNF461Q8TAF7 563 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 FIBINQ8TAL6 211 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 KIAA1143Q96AT1 154 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 ERLEC1Q96DZ1 483 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 WDR34Q96EX3 536 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 TSEN34Q9BSV6 310 aaKnown RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 LSM7Q9UK45 103 aaKnown RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 LRFN2Q9ULH4 789 aa20.69■□□□□ 0.9
SPSB3-208ENST00000566339 LSM2Q9Y333 95 aaKnown RBP20.69■□□□□ 0.9
SPSB3-208ENST00000566339 C2orf78A6NCI8 922 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 CENPXA8MT69 81 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 ZNF197O14709 1029 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 GATMP50440 423 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 CDK6Q00534 326 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 MED22Q15528 200 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 SSX1Q16384 188 aa20.68■□□□□ 0.9
SPSB3-208ENST00000566339 TAS1R1Q7RTX1 841 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms