RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CLEC1AQ8NC01 280 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 CD99L2Q8TCZ2 262 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 RNASE8Q8TDE3 154 aaKnown RBP3.8□□□□□ -1.8
CHD9-215ENST00000565442 BCL2L2Q92843 193 aaPredicted RBP3.8□□□□□ -1.8
CHD9-215ENST00000565442 SLCO2A1Q92959 643 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 SLC35C1Q96A29 364 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 CNRIP1Q96F85 164 aaPredicted RBP3.8□□□□□ -1.8
CHD9-215ENST00000565442 EPSTI1Q96J88 318 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 ZNF300Q96RE9 604 aaPredicted RBP3.8□□□□□ -1.8
CHD9-215ENST00000565442 PCDHB18PQ96TA0 734 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 UBAC1Q9BSL1 405 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 MID1IP1Q9NPA3 183 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 LNPEPQ9UIQ6 1025 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 hCG_38984A0A1B0GV85 526 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 NPIPB9F8W1W9 429 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 CACNB4O00305 520 aaPredicted RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 CLN5O75503 358 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 RPLP0P05388 317 aaKnown RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 ZSCAN5DPP0CG00 497 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 EZRP15311 586 aaKnown RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 C4BPBP20851 252 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 CLCN4P51793 760 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 CYCSP99999 105 aaKnown RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 DHODHQ02127 395 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 CNTN1Q12860 1018 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 RPA4Q13156 261 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 LASP1Q14847 261 aaKnown RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 ZER1Q7Z7L7 766 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 SLC22A15Q8IZD6 547 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 WDSUB1Q8N9V3 476 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 RNF149Q8NC42 400 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 OR13C5Q8NGS8 318 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 RPLP0P6Q8NHW5 317 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 MGARPQ8TDB4 240 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 ATP8B4Q8TF62 1192 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 CHURC1Q8WUH1 139 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 SMPDL3AQ92484 453 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 GGHQ92820 318 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 PDLIM5Q96HC4 596 aaKnown RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 KRT12Q99456 494 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 NAPBQ9H115 298 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 MTHFD2LQ9H903 347 aaPredicted RBP3.79□□□□□ -1.8
CHD9-215ENST00000565442 B3GAT2Q9NPZ5 323 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 PNPLA3Q9NST1 481 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 BARHL2Q9NY43 387 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 BAIAP2L1Q9UHR4 511 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 PSORS1C1Q9UIG5 152 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 ETV7Q9Y603 341 aa3.79□□□□□ -1.8
CHD9-215ENST00000565442 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 NKX6-3A6NJ46 265 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 SIGLEC5O15389 551 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 TLX2O43763 284 aaPredicted RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 KERAO60938 352 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 CEACAM4O75871 244 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 ODC1P11926 461 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 SKILP12757 684 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 TYMPP19971 482 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 GIFP27352 417 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 PDHA2P29803 388 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 FEN1P39748 380 aaKnown RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 VEGFCP49767 419 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 UCP2P55851 309 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 PMP22Q01453 160 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 AP1B1Q10567 949 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 NPRL3Q12980 569 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 LCP2Q13094 533 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 C2orf76Q3KRA6 126 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 LYPLAL1Q5VWZ2 237 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 ZNF776Q68DI1 518 aaPredicted RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 KIF6Q6ZMV9 814 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 RFPL4BQ6ZWI9 263 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 Q71RC1 249 aaPredicted RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 DND1Q8IYX4 353 aaKnown RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 SLC43A2Q8N370 569 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 NUP37Q8NFH4 326 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 ULK4Q96C45 1275 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 ZNF274Q96GC6 653 aaPredicted RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 C5orf30Q96GV9 206 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 LURAP1Q96LR2 239 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 ACAT2Q9BWD1 397 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 PAPOLGQ9BWT3 736 aaKnown RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 MRPL9Q9BYD2 267 aaKnown RBP3.78□□□□□ -1.8
CHD9-215ENST00000565442 MED20Q9H944 212 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 DNAJC11Q9NVH1 559 aa3.78□□□□□ -1.8
CHD9-215ENST00000565442 RNF123Q5XPI4 1314 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 TMEM129A0AVI4 362 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 GTPBP10A4D1E9 387 aaKnown RBP3.77□□□□□ -1.81
CHD9-215ENST00000565442 LMO7DNF2Z398 122 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 DDX39AO00148 427 aaKnown RBP3.77□□□□□ -1.81
CHD9-215ENST00000565442 CHUKO15111 745 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 B4GAT1O43505 415 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 SYT7O43581 403 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 GAS8O95995 478 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 CHRNGP07510 517 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 NUDT17P0C025 328 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 P4HA1P13674 534 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 CLK1P49759 484 aaKnown RBP3.77□□□□□ -1.81
CHD9-215ENST00000565442 GPR50Q13585 617 aa3.77□□□□□ -1.81
CHD9-215ENST00000565442 NECTIN1Q15223 517 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms