RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FCRL1Q96LA6 429 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 GFM1Q96RP9 751 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 CCDC106Q9BWC9 280 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 SORBS1Q9BX66 1292 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 NLNQ9BYT8 704 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 BRINP2Q9C0B6 783 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 SLC6A16Q9GZN6 736 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 REXO4Q9GZR2 422 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 AICDAQ9GZX7 198 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 CHRNA10Q9GZZ6 450 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 ZNF768Q9H5H4 540 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 SEMA5BQ9P283 1151 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 PLCL2Q9UPR0 1127 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 DLGAP4Q9Y2H0 992 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 GNG14A0A1W2PPG7 69 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 URADA6NGE7 173 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 D6RAR5 112 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 PSMD12O00232 456 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 RTCAO00442 366 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 PLPP1O14494 284 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ERI3O43414 337 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 HCRTR1O43613 425 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 BRINP1O60477 761 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 UBOX5O94941 541 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 KLK1P06870 262 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ANKRD34CP0C6C1 535 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 THRAP10827 490 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 PRPS2P11908 318 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SDC1P18827 310 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 GPX3P22352 226 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SSR2P43308 183 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 MRPL19P49406 292 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 PLA2G16P53816 162 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 CXADRP78310 365 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 RAE1P78406 368 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 TGM3Q08188 693 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SPIDRQ14159 915 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 KRT72Q14CN4 511 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 HKDC1Q2TB90 917 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 TMTC4Q5T4D3 741 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 GALNT18Q6P9A2 607 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 TRIM40Q6P9F5 258 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ABHD17CQ6PCB6 329 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 PAOXQ6QHF9 649 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ZNF574Q6ZN55 896 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 PAGE2Q7Z2X7 111 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 NUDT13Q86X67 352 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 TREML1Q86YW5 311 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SPACA3Q8IXA5 215 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 KCT2Q8NC54 265 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SRFBP1Q8NEF9 429 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 OR2L5Q8NG80 312 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 CLHC1Q8NHS4 586 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 CDC26Q8NHZ8 85 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 WDR48Q8TAF3 677 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ZCCHC10Q8TBK6 192 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 KLHL6Q8WZ60 621 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 N4BP2L2Q92802 583 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 MS4A6EQ96DS6 147 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 C11orf24Q96F05 449 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 NAF1Q96HR8 494 aaKnown RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SLC41A2Q96JW4 573 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 CCDC74BQ96LY2 380 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 QRFPRQ96P65 431 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 KCNC2Q96PR1 638 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 C17orf62Q9BQA9 187 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 KLHL31Q9H511 634 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SDR39U1Q9NRG7 319 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-205ENST00000564899 IRAK4Q9NWZ3 460 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 SIRT5Q9NXA8 310 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 ZIM2Q9NZV7 527 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 MCM8Q9UJA3 840 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 AK5Q9Y6K8 562 aa10.54□□□□□ -0.72
SF3B3-205ENST00000564899 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 A0A0G2JN53 185 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 IGHV5-10-1A0A0J9YXX1 117 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 ARHGAP10A1A4S6 786 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 ERICH4A6NGS2 130 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 CAPN14A8MX76 684 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 C4orf51C9J302 202 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 TXNDC9O14530 226 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 ZSCAN9O15535 394 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-205ENST00000564899 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-205ENST00000564899 EEDO75530 441 aaKnown RBP10.53□□□□□ -0.72
SF3B3-205ENST00000564899 SLC22A3O75751 556 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 ANXA4P09525 319 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-205ENST00000564899 ZNF888P0CJ79 500 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-205ENST00000564899 PCSK2P16519 638 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 NELFEP18615 380 aaKnown RBP10.53□□□□□ -0.72
SF3B3-205ENST00000564899 TACR1P25103 407 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 BSGP35613 385 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 GABRA4P48169 554 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 ARFIP1P53367 373 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 RAB8AP61006 207 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 LY6DQ14210 128 aa10.53□□□□□ -0.72
SF3B3-205ENST00000564899 KCNAB1Q14722 419 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms