RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CD22P20273 847 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 PLA2G16P53816 162 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 TGM3Q08188 693 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 SFT2D3Q587I9 215 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 MED27Q6P2C8 311 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 CA13Q8N1Q1 262 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 OR2L5Q8NG80 312 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 ISL2Q96A47 359 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 CNDP1Q96KN2 507 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 PTCHD1Q96NR3 888 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 NPLQ9BXD5 320 aaPredicted RBP17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 TNPO3Q9Y5L0 923 aaKnown RBP17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 DYTNA2CJ06 578 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 C4orf51C9J302 202 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 RIPK2O43353 540 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 B3GALT2O43825 422 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 KLK8O60259 260 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 ITGAMP11215 1152 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 PCNAP12004 261 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 MAGEA12P43365 314 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 OR4D2P58180 307 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 ARG2P78540 354 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 NAA30Q147X3 362 aaPredicted RBP17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 EXT1Q16394 746 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 TSNAXIP1Q2TAA8 658 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 ADPRMQ3LIE5 342 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 TECRLQ5HYJ1 363 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 PLAG1Q6DJT9 500 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 PAPD4Q6PIY7 484 aaKnown RBP17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 QSOX2Q6ZRP7 698 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 VN1R5Q7Z5H4 357 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 MYLK4Q86YV6 388 aaPredicted RBP17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 SRFBP1Q8NEF9 429 aaKnown RBP17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 PSMF1Q92530 271 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 TSLPQ969D9 159 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 MAGEB10Q96LZ2 347 aaPredicted RBP17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 LPAR4Q99677 370 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 COPS7BQ9H9Q2 264 aaPredicted RBP17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 ZNF358Q9NW07 568 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 CSAG2Q9Y5P2 127 aa17.26■□□□□ 0.35
SYNGR3-204ENST00000564642 FAM227AF5H4B4 570 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 FAM153BP0C7A2 387 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 BTG2P78543 158 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 RUNX2Q13950 521 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 E2F2Q14209 437 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 PCBP2Q15366 365 aaKnown RBP eCLIP17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 TLR1Q15399 786 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 FAM153CQ494X1 144 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 PRR30Q53SZ7 412 aaPredicted RBP17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 ADNP2Q6IQ32 1131 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 CUZD1Q86UP6 607 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 CYP4X1Q8N118 509 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 CISD2Q8N5K1 135 aaKnown RBP17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 LRRN4CLQ8ND94 238 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 ARMC2Q8NEN0 867 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 M1APQ8TC57 530 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 SNRNP40Q96DI7 357 aaKnown RBP17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 F2RL3Q96RI0 385 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 SERINC2Q96SA4 455 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 ACTR8Q9H981 624 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 KCNK13Q9HB14 408 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 PRDM9Q9NQV7 894 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 ADGRE2Q9UHX3 823 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 TEKT2Q9UIF3 430 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 TMCO1Q9UM00 188 aa17.25■□□□□ 0.35
SYNGR3-204ENST00000564642 A8MUI8 341 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 SMIM24O75264 130 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 SERPINB1P30740 379 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 SOX11P35716 441 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 PIK3CGP48736 1102 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 MTTPP55157 894 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 GTF2H2Q13888 395 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 ZNF169Q14929 603 aaPredicted RBP17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 TEX35Q5T0J7 233 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 ABHD17BQ5VST6 288 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 LIPJQ5W064 366 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 B3GNTL1Q67FW5 361 aaPredicted RBP17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 GRHL2Q6ISB3 625 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 GTF2H2CQ6P1K8 395 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 METTL2BQ6P1Q9 378 aaKnown RBP17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 ABHD17CQ6PCB6 329 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 ADGRD1Q6QNK2 874 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 CHSY3Q70JA7 882 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 LAS2Q8IYD9 372 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 GALNT11Q8NCW6 608 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 OR7G3Q8NG95 312 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 ZNF473Q8WTR7 871 aaKnown RBP17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 MTBPQ96DY7 904 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 PHF21BQ96EK2 531 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 QRFPRQ96P65 431 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 CCDC77Q9BR77 488 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 SLC29A3Q9BZD2 475 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 ROGDIQ9GZN7 287 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 IPPKQ9H8X2 491 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 STMN3Q9NZ72 180 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 PCDHGA11Q9Y5H2 935 aa17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 COPG1Q9Y678 874 aaKnown RBP17.24■□□□□ 0.35
SYNGR3-204ENST00000564642 CPAMD8Q8IZJ3 1885 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 LRRC14BA6NHZ5 514 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms