RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 HRH3Q9Y5N1 445 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 CTAGE15A4D2H0 777 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 NKX2-6A6NCS4 301 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 FAM90A27PA6NNH2 459 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 A8MUA0 341 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 C4orf51C9J302 202 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 TTC4O95801 387 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 TUBB4AP04350 444 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 SMIM10L1P0DMW3 83 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 HNF4AP41235 474 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 GPR85P60893 370 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
CDR2-204ENST00000564542 CYP1B1Q16678 543 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
CDR2-204ENST00000564542 MDGA2Q7Z553 956 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 GALNT7Q86SF2 657 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 CTAGE6Q86UF2 777 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 PPIL6Q8IXY8 311 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 CA13Q8N1Q1 262 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 RND1Q92730 232 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 VMP1Q96GC9 406 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 SMIM10Q96HG1 83 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 AIF1LQ9BQI0 150 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 RHBGQ9H310 441 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 TIMMDC1Q9NPL8 285 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
CDR2-204ENST00000564542 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
CDR2-204ENST00000564542 TOXO94900 526 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 GUCA1CO95843 209 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 AHSGP02765 367 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 SERPINA6P08185 405 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 SSR4P51571 173 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 SPANXN3Q5MJ09 141 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 SBSNQ6UWP8 590 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 TMPRSS11BQ86T26 416 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 SCUBE1Q8IWY4 988 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 GPALPP1Q8IXQ4 340 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 DMRTC2Q8IXT2 367 aaPredicted RBP13.13□□□□□ -0.31
CDR2-204ENST00000564542 RASGEF1CQ8N431 466 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 RPRMLQ8N4K4 120 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 PSD4Q8NDX1 1056 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 OR52N2Q8NGI0 321 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 NCLNQ969V3 563 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 KCNJ16Q9NPI9 418 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 FBXW2Q9UKT8 454 aa13.13□□□□□ -0.31
CDR2-204ENST00000564542 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
CDR2-204ENST00000564542 ACOT7O00154 380 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 PDE9AO76083 593 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 PPP1R3AQ16821 1122 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 EMC4Q5J8M3 183 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 TOR1AIP1Q5JTV8 583 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 RNASEH2BQ5TBB1 312 aaKnown RBP13.12□□□□□ -0.31
CDR2-204ENST00000564542 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 PAOXQ6QHF9 649 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 NXPE4Q6UWF7 544 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 THOC6Q86W42 341 aaKnown RBP13.12□□□□□ -0.31
CDR2-204ENST00000564542 GPATCH11Q8N954 259 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 CREB3L4Q8TEY5 395 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 GAL3ST3Q96A11 431 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 CERS2Q96G23 380 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 PDLIM5Q96HC4 596 aaKnown RBP13.12□□□□□ -0.31
CDR2-204ENST00000564542 MS4A14Q96JA4 679 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 CCDC77Q9BR77 488 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 UCK2Q9BZX2 261 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 AICDAQ9GZX7 198 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 DEPPQ9NTK1 212 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 CORO1CQ9ULV4 474 aaPredicted RBP13.12□□□□□ -0.31
CDR2-204ENST00000564542 ERVK-11Q9UQG0 969 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 YARS2Q9Y2Z4 477 aaKnown RBP13.12□□□□□ -0.31
CDR2-204ENST00000564542 KCNE2Q9Y6J6 123 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 ITPR3Q14573 2671 aa13.12□□□□□ -0.31
CDR2-204ENST00000564542 A8MVJ9 347 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 ZFAND5O76080 213 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
CDR2-204ENST00000564542 GPR143P51810 404 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 ART1P52961 327 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 PGGT1BP53609 377 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 HSD17B7P56937 341 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 NUP107P57740 925 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 STXBP1P61764 594 aaKnown RBP13.11□□□□□ -0.31
CDR2-204ENST00000564542 PMPCAQ10713 525 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
CDR2-204ENST00000564542 FAM45BPQ6NSW5 357 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 CCDC71Q8IV32 467 aaPredicted RBP13.11□□□□□ -0.31
CDR2-204ENST00000564542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDR2-204ENST00000564542 FAM45AQ8TCE6 357 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 GRK7Q8WTQ7 553 aa13.11□□□□□ -0.31
CDR2-204ENST00000564542 FAR2Q96K12 515 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms