RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 DCLRE1BQ9H816 532 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 MRPS30Q9NP92 439 aaKnown RBP9.31□□□□□ -0.92
UBFD1-203ENST00000564106 TMEM184CQ9NVA4 438 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 TAAR2Q9P1P5 351 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 SLC7A8Q9UHI5 535 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 SNX7Q9UNH6 387 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 ICKQ9UPZ9 632 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 AP3M1Q9Y2T2 418 aa9.31□□□□□ -0.92
UBFD1-203ENST00000564106 TLN1Q9Y490 2541 aaKnown RBP9.31□□□□□ -0.92
UBFD1-203ENST00000564106 COL6A6A6NMZ7 2263 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 CCDC187A0A096LP49 1063 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 A0A1W2PPV9 198 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 TRBC2A0A5B9 178 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 C9orf172C9J069 976 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 FBP2O00757 339 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 PPM1DO15297 605 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 RRP8O43159 456 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 FKBP6O75344 327 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ATP6V1G2O95670 118 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SDC1P18827 310 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ME2P23368 584 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 TIA1P31483 386 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SLC5A2P31639 672 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 HPCAL1P37235 193 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 HNRNPFP52597 415 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 NME5P56597 212 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ACTR3P61158 418 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 RPS13P62277 151 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SRSF11Q05519 484 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ZFP36L1Q07352 338 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ZNF763Q0D2J5 394 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 NFYCQ13952 458 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 LY6DQ14210 128 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 PTGR1Q14914 329 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 VPS26BQ4G0F5 336 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 C14orf28Q4W4Y0 310 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 TIGD2Q4W5G0 525 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 NKAIN2Q5VXU1 208 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 PGM2L1Q6PCE3 622 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 KLHL35Q6PF15 583 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 IKBIPQ70UQ0 350 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 GPR155Q7Z3F1 870 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ADCK2Q7Z695 626 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 LMNTD1Q8N9Z9 388 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 TRPV3Q8NET8 790 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 OR2L3Q8NG85 312 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 WDR36Q8NI36 951 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SLC13A3Q8WWT9 602 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 NAT6Q93015 286 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 RNF31Q96EP0 1072 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 LIN37Q96GY3 246 aaPredicted RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 GFM1Q96RP9 751 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 CDRT15Q96T59 188 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SH3GL1Q99961 368 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SARGQ9BW04 601 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 MUC13Q9H3R2 512 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ADA2Q9NZK5 511 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 ZNF624Q9P2J8 865 aaPredicted RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 SUCOQ9UBS9 1254 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 PISDQ9UG56 409 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 BAIAP2L1Q9UHR4 511 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 WBP11Q9Y2W2 641 aaKnown RBP9.3□□□□□ -0.92
UBFD1-203ENST00000564106 PCDHGA8Q9Y5G5 932 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 HEATR5BQ9P2D3 2071 aa9.3□□□□□ -0.92
UBFD1-203ENST00000564106 TRBV23OR9-2A0A075B6M9 112 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PRAMEF33A0A0G2JMD5 474 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 GNG14A0A1W2PPG7 69 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 C2orf74A8MZ97 194 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ISM1B1AKI9 464 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PLD2O14939 933 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PRICKLE3O43900 615 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PCDH7O60245 1069 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PRAMEF10O60809 474 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 CLEC3AO75596 197 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 KCNH1O95259 989 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PGRP06401 933 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 CHRM5P08912 532 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ANXA4P09525 319 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 CCL4P13236 92 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 AHRP35869 848 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 SLC19A1P41440 591 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 TSFMP43897 325 aaKnown RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 UBE2IP63279 158 aaKnown RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 BNIP2Q12982 314 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 MAPKAPK3Q16644 382 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 FAM174BQ3ZCQ3 159 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 TMEM35AQ53FP2 167 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PIGGQ5H8A4 983 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 KHDRBS2Q5VWX1 349 aaKnown RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 C8orf82Q6P1X6 216 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 USP53Q70EK8 1073 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 RAB11FIP2Q7L804 512 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ZNF438Q7Z4V0 828 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 R3HCC1LQ7Z5L2 792 aaKnown RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 DHDDSQ86SQ9 333 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms