RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TMEM198Q66K66 360 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 TMEM214Q6NUQ4 689 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 GALNT18Q6P9A2 607 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 TRIM40Q6P9F5 258 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 ABHD17CQ6PCB6 329 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 UBE3DQ7Z6J8 389 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 B3GNT8Q7Z7M8 397 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 C1orf52Q8N6N3 182 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 KCT2Q8NC54 265 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 RCBTB1Q8NDN9 531 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 ZNF501Q96CX3 271 aaPredicted RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 SMIM10Q96HG1 83 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 QRFPRQ96P65 431 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 KCNC2Q96PR1 638 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 MACROD1Q9BQ69 325 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 TBCDQ9BTW9 1192 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 ROGDIQ9GZN7 287 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 AICDAQ9GZX7 198 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 KLHL31Q9H511 634 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 FANCEQ9HB96 536 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 FGF21Q9NSA1 209 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 MRGBPQ9NV56 204 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 SIDT1Q9NXL6 827 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 NOP53Q9NZM5 478 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 ADAM29Q9UKF5 820 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 EIF3LQ9Y262 564 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 APC2O95996 2303 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 FITM1A5D6W6 292 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 H3BMH7 237 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 SAP18O00422 153 aaKnown RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 ERI3O43414 337 aaKnown RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 ALDOCP09972 364 aaKnown RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 PRPS2P11908 318 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 IDO1P14902 403 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 TIA1P31483 386 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPG7-209ENST00000564047 BSGP35613 385 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 MRPL19P49406 292 aaKnown RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 ATP4BP51164 291 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 KCNJ2P63252 427 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 SIM1P81133 766 aaPredicted RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 GRM7Q14831 915 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 GPR19Q15760 415 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 GSTA3Q16772 222 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 COL28A1Q2UY09 1125 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 GARNL3Q5VVW2 1013 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 IL23RQ5VWK5 629 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 OR4C11Q6IEV9 310 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 NOXRED1Q6NXP6 359 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 ABHD13Q7L211 337 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 PAGE2Q7Z2X7 111 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 COMMD6Q7Z4G1 85 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 CLNKQ7Z7G1 428 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 BPHLQ86WA6 291 aaPredicted RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 NUDT13Q86X67 352 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 ARHGEF39Q8N4T4 335 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 AGBL5Q8NDL9 886 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 OR8K5Q8NH50 307 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 UTP15Q8TED0 518 aaKnown RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 ZNF717Q9BY31 904 aaPredicted RBP12.27□□□□□ -0.45
SPG7-209ENST00000564047 ZNF385DQ9H6B1 395 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 PRDM7Q9NQW5 492 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 AIG1Q9NVV5 245 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 MCM8Q9UJA3 840 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 SERTAD3Q9UJW9 196 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 SLC22A7Q9Y694 548 aa12.27□□□□□ -0.45
SPG7-209ENST00000564047 A0A088AWK7 358 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 SPAARA0A1B0GVQ0 90 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 TMEM150CB9EJG8 249 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 PCDH7O60245 1069 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 OR2B3O76000 313 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 SCELO95171 688 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 MT-CO3P00414 261 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 CTSBP07858 339 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 FTH1P19P0C7X4 201 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 T-ENOLP0DO92 83 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 ALOX12P18054 663 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 NCF2P19878 526 aaPredicted RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 ZNF10P21506 573 aaPredicted RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 PTPN4P29074 926 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 PLA2G16P53816 162 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 DIO3P55073 304 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 ITGA1P56199 1179 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 RAE1P78406 368 aaKnown RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 C16orf72Q14CZ0 275 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 HERC3Q15034 1050 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 NDUFA9Q16795 377 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 ISXQ2M1V0 245 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 YOD1Q5VVQ6 348 aaPredicted RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 NIPAL1Q6NVV3 410 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 TLDC1Q6P9B6 456 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 DHRS13Q6UX07 377 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 MTDHQ86UE4 582 aaKnown RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 SLCO6A1Q86UG4 719 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 GPR135Q8IZ08 494 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 FAM9CQ8IZT9 166 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 CPSF7Q8N684 471 aaKnown RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 TTC29Q8NA56 475 aaPredicted RBP12.26□□□□□ -0.45
SPG7-209ENST00000564047 OR1L3Q8NH93 324 aa12.26□□□□□ -0.45
SPG7-209ENST00000564047 CATSPER2Q96P56 530 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms