RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ALDH18A1P54886 795 aaKnown RBP28.92■■■□□ 2.22
CMTM4-204ENST00000563952 FAM153CQ494X1 144 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 TECRLQ5HYJ1 363 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 TRIM40Q6P9F5 258 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 CISD2Q8N5K1 135 aaKnown RBP28.92■■■□□ 2.22
CMTM4-204ENST00000563952 SCYL1Q96KG9 808 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 PTCHD1Q96NR3 888 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 NBASA2RRP1 2371 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 MYO18BQ8IUG5 2567 aa28.92■■■□□ 2.22
CMTM4-204ENST00000563952 UBR5O95071 2799 aaPredicted RBP28.91■■■□□ 2.22
CMTM4-204ENST00000563952 SPENQ96T58 3664 aaKnown RBP28.91■■■□□ 2.22
CMTM4-204ENST00000563952 LRRC14BA6NHZ5 514 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 PRMT3O60678 531 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 TBX6O95947 436 aaPredicted RBP28.91■■■□□ 2.22
CMTM4-204ENST00000563952 ABHD2P08910 425 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 PCNAP12004 261 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 OR4D2P58180 307 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 BTG2P78543 158 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 B3GNTL1Q67FW5 361 aaPredicted RBP28.91■■■□□ 2.22
CMTM4-204ENST00000563952 MED27Q6P2C8 311 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 PAPD4Q6PIY7 484 aaKnown RBP28.91■■■□□ 2.22
CMTM4-204ENST00000563952 OR2L5Q8NG80 312 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 UBE2E3Q969T4 207 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 C19orf60Q96EN9 201 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 F2RL3Q96RI0 385 aa28.91■■■□□ 2.22
CMTM4-204ENST00000563952 A0A088AWK7 358 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 RIPK2O43353 540 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 MAOAP21397 527 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 ZNF10P21506 573 aaPredicted RBP28.9■■■□□ 2.22
CMTM4-204ENST00000563952 ARG2P78540 354 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 RUNX2Q13950 521 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 NAA30Q147X3 362 aaPredicted RBP28.9■■■□□ 2.22
CMTM4-204ENST00000563952 ADPRMQ3LIE5 342 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 PLAG1Q6DJT9 500 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 MYLK4Q86YV6 388 aaPredicted RBP28.9■■■□□ 2.22
CMTM4-204ENST00000563952 GSPT2Q8IYD1 628 aaKnown RBP28.9■■■□□ 2.22
CMTM4-204ENST00000563952 SNRNP40Q96DI7 357 aaKnown RBP28.9■■■□□ 2.22
CMTM4-204ENST00000563952 QRFPRQ96P65 431 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 LPAR4Q99677 370 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 PLA2G3Q9NZ20 509 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 PCDHGA10Q9Y5H3 936 aa28.9■■■□□ 2.22
CMTM4-204ENST00000563952 B3GALT2O43825 422 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 KLK8O60259 260 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 RBP1P09455 135 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 E2F2Q14209 437 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 QSOX2Q6ZRP7 698 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 CYP4X1Q8N118 509 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 GALNT11Q8NCW6 608 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 CATSPER1Q8NEC5 780 aa28.89■■■□□ 2.22
CMTM4-204ENST00000563952 COPS7BQ9H9Q2 264 aaPredicted RBP28.89■■■□□ 2.22
CMTM4-204ENST00000563952 DYTNA2CJ06 578 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 A8MUI8 341 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 SH3BGRLO75368 114 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 SIX3O95343 332 aaPredicted RBP28.88■■■□□ 2.21
CMTM4-204ENST00000563952 F10P00742 488 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 SNRPAP09012 282 aaKnown RBP28.88■■■□□ 2.21
CMTM4-204ENST00000563952 UQCRFS1P47985 274 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 TGM3Q08188 693 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 ZNF169Q14929 603 aaPredicted RBP28.88■■■□□ 2.21
CMTM4-204ENST00000563952 TLR1Q15399 786 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 EXT1Q16394 746 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 TSNAXIP1Q2TAA8 658 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 ABHD17CQ6PCB6 329 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 LAS2Q8IYD9 372 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 NPLQ9BXD5 320 aaPredicted RBP28.88■■■□□ 2.21
CMTM4-204ENST00000563952 KCNK13Q9HB14 408 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 PRDM9Q9NQV7 894 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 ASF1BQ9NVP2 202 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 XPR1Q9UBH6 696 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 TNPO3Q9Y5L0 923 aaKnown RBP28.88■■■□□ 2.21
CMTM4-204ENST00000563952 SHANK1Q9Y566 2161 aa28.88■■■□□ 2.21
CMTM4-204ENST00000563952 GNLYP22749 145 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 CERS1P27544 350 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 ZNF33BQ06732 778 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 PCDH1Q08174 1060 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 GTF2H2Q13888 395 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 PCBP2Q15366 365 aaKnown RBP eCLIP28.87■■■□□ 2.213e-12■■■■■ 52.8
CMTM4-204ENST00000563952 TEX35Q5T0J7 233 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 LGSNQ5TDP6 509 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 ABHD17BQ5VST6 288 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 GRHL2Q6ISB3 625 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 GTF2H2CQ6P1K8 395 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 PTGR2Q8N8N7 351 aaPredicted RBP28.87■■■□□ 2.21
CMTM4-204ENST00000563952 OR7G3Q8NG95 312 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 ZNF473Q8WTR7 871 aaKnown RBP28.87■■■□□ 2.21
CMTM4-204ENST00000563952 SERINC2Q96SA4 455 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 MS4A8Q9BY19 250 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 ACTR8Q9H981 624 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 CPAMD8Q8IZJ3 1885 aa28.87■■■□□ 2.21
CMTM4-204ENST00000563952 COL6A2P12110 1019 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 GCAP28676 217 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 MTTPP55157 894 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 RAB38P57729 211 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 DDX39BQ13838 428 aaKnown RBP28.86■■■□□ 2.21
CMTM4-204ENST00000563952 GOLGA7Q7Z5G4 137 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 ARMC2Q8NEN0 867 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 M1APQ8TC57 530 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 PHF21BQ96EK2 531 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 SLC29A3Q9BZD2 475 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 NECTIN3Q9NQS3 549 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms