RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GBP6Q6ZN66 633 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 RTL4Q6ZR62 310 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 KIAA1328Q86T90 577 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 NOP9Q86U38 636 aaKnown RBP9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 TBC1D21Q8IYX1 336 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 APCDD1LQ8NCL9 501 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 NFAM1Q8NET5 270 aaPredicted RBP9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 OR51Q1Q8NH59 317 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 JOSD2Q8TAC2 188 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 WNT2BQ93097 391 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 ZNF653Q96CK0 615 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 PGM2Q96G03 612 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 CCDC34Q96HJ3 373 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 ADGRE3Q9BY15 652 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 OPN3Q9H1Y3 402 aaPredicted RBP9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 IL26Q9NPH9 171 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 SMOXQ9NWM0 555 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 SYBUQ9NX95 663 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 PLAGL1Q9UM63 463 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 DTX4Q9Y2E6 619 aa9.61□□□□□ -0.87
HDGFL3-204ENST00000563790 H0YIG0 161 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 H7C417 338 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 EEF2KO00418 725 aaKnown RBP9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 NRP2O60462 931 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 LSM8O95777 96 aaKnown RBP9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 CRHP06850 196 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 CD3EP07766 207 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 CD48P09326 243 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 PKLRP30613 574 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 SOX3P41225 446 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 KCNJ5P48544 419 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 PRLHRP49683 370 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 EFNA4P52798 201 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 RPA4Q13156 261 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 SF1Q15637 639 aaKnown RBP9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 HKDC1Q2TB90 917 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 NHSL2Q5HYW2 709 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 AGAP6Q5VW22 663 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 SCYL2Q6P3W7 929 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 BRICD5Q6PL45 260 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 C17orf107Q6ZR85 190 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 WFDC8Q8IUA0 241 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 ARRDC2Q8TBH0 407 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 KCTD4Q8WVF5 259 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 HPS1Q92902 700 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 TBX15Q96SF7 602 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 KRT12Q99456 494 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 SLC6A7Q99884 636 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 TRIM2Q9C040 744 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 ZFP64Q9NPA5 681 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 NECAP2Q9NVZ3 263 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 AIPL1Q9NZN9 384 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 TDRKHQ9Y2W6 561 aaKnown RBP9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 PPIAL4AQ9Y536 164 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 ATP6V1DQ9Y5K8 247 aa9.6□□□□□ -0.87
HDGFL3-204ENST00000563790 TRBV11-1A0A0K0K1C0 115 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 TCRBV5S1A1TA0A578 114 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 OR2J2O76002 312 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 MMEP08473 750 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 CYP4B1P13584 511 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 CHRNB2P17787 502 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 PRTN3P24158 256 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 AVPR1BP47901 424 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 PDLIM4P50479 330 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 CLCN2P51788 898 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 PNLIPRP1P54315 467 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 IQCCQ4KMZ1 466 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 DCST1Q5T197 706 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 NCMAPQ5T1S8 102 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 TAF3Q5VWG9 929 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 VWA1Q6PCB0 445 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 RFX8Q6ZV50 586 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 CSNK1A1LQ8N752 337 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 KBTBD8Q8NFY9 601 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 OR5K2Q8NHB8 316 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 FAM110DQ8TAY7 271 aaPredicted RBP9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 ASZ1Q8WWH4 475 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 CPA5Q8WXQ8 436 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 SYN2Q92777 582 aaPredicted RBP9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 SGCZQ96LD1 299 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 CCDC138Q96M89 665 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 SLC30A3Q99726 388 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 KLHL4Q9C0H6 718 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 BPIFA1Q9NP55 256 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 RWDD2AQ9UIY3 292 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 FBXW2Q9UKT8 454 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 BOKQ9UMX3 212 aaPredicted RBP9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 ASF1AQ9Y294 204 aa9.59□□□□□ -0.87
HDGFL3-204ENST00000563790 LRP5LA4QPB2 252 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 LRRC3CA6NJW4 275 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 KDM1AO60341 852 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 P04436 131 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 CCL3P10147 92 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 PTNP21246 168 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 GMPRP36959 345 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 BCL6P41182 706 aa9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 GSCP56915 257 aaPredicted RBP9.58□□□□□ -0.88
HDGFL3-204ENST00000563790 ITGA9Q13797 1035 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms