RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ZFYVE19Q96K21 471 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ZNF607Q96SK3 696 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SEMA3GQ9NS98 782 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 BTBD3Q9Y2F9 522 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 A0A096LPI6 279 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 FADS2P1A8MWK0 482 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 LAMP1P11279 417 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 ZNF30P17039 623 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 TACR1P25103 407 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GSTM5P46439 218 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 UGT2B15P54855 530 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 PRMT2P55345 433 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 UAP1L1Q3KQV9 507 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 ARMCX4Q5H9R4 360 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 FAM26DQ5JW98 314 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GALNT12Q8IXK2 581 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 PARP16Q8N5Y8 322 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 IL17RDQ8NFM7 739 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 NFKBIDQ8NI38 313 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GTF2H4Q92759 462 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 IL17FQ96PD4 163 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 PKMYT1Q99640 499 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 FAIM2Q9BWQ8 316 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 ACPTQ9BZG2 426 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 SPHK2Q9NRA0 654 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GULP1Q9UBP9 304 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 ITM2BQ9Y287 266 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 OR7A17O14581 309 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 ACADMP11310 421 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 SPNP16150 400 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 TNFRSF1BP20333 461 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GTF2E2P29084 291 aaKnown RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 SBSNQ6UWP8 590 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 SLC43A3Q8NBI5 491 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 OR6F1Q8NGZ6 308 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GLYATL1Q969I3 302 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 ZNF583Q96ND8 569 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 TAC3Q9UHF0 121 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 SLC9A8Q9Y2E8 581 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 UTRNP46939 3433 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 HNRNPCL2B2RXH8 293 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 SLC31A1O15431 190 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 EFCAB14O75071 495 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 RHOP08100 348 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 HEPACAMQ14CZ8 416 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 PLEKHS1Q5SXH7 462 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 FAM46CQ5VWP2 391 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 GDPD3Q7L5L3 318 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 C16orf62Q7Z3J2 963 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 FAM83FQ8NEG4 500 aaPredicted RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 TFGQ92734 400 aaPredicted RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 RPL3LQ92901 407 aaKnown RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 TP53INP1Q96A56 240 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 NUS1Q96E22 293 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 P2RY13Q9BPV8 354 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 EFCAB11Q9BUY7 163 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 TTLL2Q9BWV7 592 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 CCDC59Q9P031 241 aaKnown RBP10.06□□□□□ -0.8
RNF40-204ENST00000563683 FBXW2Q9UKT8 454 aa10.06□□□□□ -0.8
RNF40-204ENST00000563683 E7EQ34 232 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 RETP07949 1114 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 PRKCAP17252 672 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 FSHRP23945 695 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 HLA-FP30511 346 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CDK6Q00534 326 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TGM3Q08188 693 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 SHQ1Q6PI26 577 aaKnown RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 RAB8BQ92930 207 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TMCO6Q96DC7 493 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TMEM246Q9BRR3 403 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 ACSL6Q9UKU0 697 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 RNF6Q9Y252 685 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 PCDHGB6Q9Y5F9 930 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 OR2A25A4D2G3 310 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 PLK4O00444 970 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 NFATC1O95644 943 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CRYZL1O95825 349 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 RPLP0P05388 317 aaKnown RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 ACP5P13686 325 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 HMGA1P17096 107 aaKnown RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 SDC1P18827 310 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CD6P30203 668 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 MASP1P48740 699 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 MXD1Q05195 221 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 FPGSQ05932 587 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 SPIN4Q56A73 249 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 DCST1Q5T197 706 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 ARMC6Q6NXE6 501 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TMIGD1Q6UXZ0 262 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 MACC1Q6ZN28 852 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 GATAD2AQ86YP4 633 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 ZZZ3Q8IYH5 903 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TCEAL8Q8IYN2 117 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 FAM86B1Q8N7N1 296 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 OR10G6Q8NH81 332 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 OR14C36Q8NHC7 312 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 POF1BQ8WVV4 589 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms