RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 KCTD6Q8NC69 237 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 OR6T1Q8NGN1 323 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 OR1B1Q8NGR6 318 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 SLC26A7Q8TE54 656 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 RANBP9Q96S59 729 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 RPF1Q9H9Y2 349 aaKnown RBP2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 CUTCQ9NTM9 273 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 THYN1Q9P016 225 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 DHRS4-AS1Q9P1J3 65 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 BCCIPQ9P287 314 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 DBF4Q9UBU7 674 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 GTF3C4Q9UKN8 822 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 TRAV18A0A075B6X5 111 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 LOC390937A0A1W2PQ73 354 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 IGLON5A6NGN9 336 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 TMEM150CB9EJG8 249 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 ANHXE9PGG2 379 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 ANGPTL1O95841 491 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 UMPSP11172 480 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 EEF2P13639 858 aaKnown RBP2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 AKR1B1P15121 316 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 IL11P20809 199 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 PEX3P56589 373 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 AIMP1Q12904 312 aaKnown RBP2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 FAM174BQ3ZCQ3 159 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 SLC22A6Q4U2R8 563 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 LRRC73Q5JTD7 316 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 CFAP58Q5T655 872 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 MARC1Q5VT66 337 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 DMKNQ6E0U4 476 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 BTNL8Q6UX41 500 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 C15orf52Q6ZUT6 534 aaKnown RBP2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 BRINP3Q76B58 766 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 GPR141Q7Z602 305 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 CAMKVQ8NCB2 501 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 OR6J1Q8NGC5 347 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 FLVCR1-AS1Q8TAF5 88 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 ALKBH3Q96Q83 286 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 C5orf66Q9H5L9 145 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 C10orf88Q9H8K7 445 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 PLEKHA3Q9HB20 300 aa2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 RUVBL2Q9Y230 463 aaKnown RBP2.35□□□□□ -2.03
HMGB1P33-201ENST00000563485 COL4A4P53420 1690 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 TEX48A0A1B0GUV7 120 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 FBP2O00757 339 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PGRMC2O15173 223 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 KBTBD11O94819 623 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PENKP01210 267 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PRB2P02812 416 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 SUPT20HL2P0C7V6 817 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 ATP6V1B1P15313 513 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 CDX1P47902 265 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 RPL34P49207 117 aaKnown RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 GMPSP49915 693 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PPP5CP53041 499 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 LTB4RQ15722 352 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 CCL14Q16627 93 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 TCEAL6Q6IPX3 200 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PAMR1Q6UXH9 720 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PPP1R21Q6ZMI0 780 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 CD99L2Q8TCZ2 262 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 GRK7Q8WTQ7 553 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 RMDN2Q96LZ7 410 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 RCHY1Q96PM5 261 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 NUDT16L1Q9BRJ7 211 aaKnown RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 PINK1Q9BXM7 581 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 ANKRD2Q9GZV1 360 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 TMX4Q9H1E5 349 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 LIME1Q9H400 295 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 DPEP2Q9H4A9 486 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 SP140LQ9H930 580 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 RAB9BQ9NP90 201 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 MRGBPQ9NV56 204 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 ARMCX1Q9P291 453 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 UBQLN2Q9UHD9 624 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 MGAT4AQ9UM21 535 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 NIP7Q9Y221 180 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 NCKAP1Q9Y2A7 1128 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 MRPL11Q9Y3B7 192 aaKnown RBP2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 KLK4Q9Y5K2 254 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 LIPGQ9Y5X9 500 aa2.34□□□□□ -2.03
HMGB1P33-201ENST00000563485 TRAV9-2A0A087WT02 112 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 SYNDIG1LA6NDD5 238 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 H0Y9J4 135 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 CDX4O14627 284 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 SPP1P10451 314 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 RPL9P32969 192 aaKnown RBP2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 SPRP35270 261 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 OR3A3P47888 321 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 IST1P53990 364 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 CNTN1Q12860 1018 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 PRPF4BQ13523 1007 aaKnown RBP2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 EIF4EBP2Q13542 120 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 MAPK11Q15759 364 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 KRT80Q6KB66 452 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 CFAP161Q6P656 301 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 NAXDQ8IW45 347 aa2.33□□□□□ -2.04
HMGB1P33-201ENST00000563485 LIPHQ8WWY8 451 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms