RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TNFSF9P41273 254 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 OR1G1P47890 313 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ALDH3A2P51648 485 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 OSTNP61366 133 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ASIC1P78348 528 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 MRPS5P82675 430 aaKnown RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SCN1BQ07699 218 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 WASHC5Q12768 1159 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SLMAPQ14BN4 828 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 E2F5Q15329 346 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 PTPN14Q15678 1187 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 UPP1Q16831 310 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF674Q2M3X9 581 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 GLRA4Q5JXX5 417 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 LRIF1Q5T3J3 769 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 PLPP4Q5VZY2 271 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 NSUN5P2Q63ZY6 315 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 FUT10Q6P4F1 479 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CD300LGQ6UXG3 332 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TSPAN33Q86UF1 283 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CD302Q8IX05 232 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 C12orf56Q8IXR9 622 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 MRPL43Q8N983 215 aaKnown RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ZBTB8BQ8NAP8 495 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SPC24Q8NBT2 197 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 KIAA0895Q8NCT3 520 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 MCUQ8NE86 351 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 VN1R2Q8NFZ6 395 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SCFD1Q8WVM8 642 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 FBXO17Q96EF6 278 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ELMOD3Q96FG2 381 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 PAGE5Q96GU1 130 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 FER1L6-AS2Q96M78 137 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 DUX3Q96PT4 197 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ACCSQ96QU6 501 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TCHPQ9BT92 498 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CCDC106Q9BWC9 280 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 BLZF1Q9H2G9 400 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM206Q9H813 350 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 UBE2ZQ9H832 354 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 COPS7BQ9H9Q2 264 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SLC38A7Q9NVC3 462 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ARHGEF38Q9NXL2 777 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CHMP5Q9NZZ3 219 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TBC1D7Q9P0N9 293 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 WDR35Q9P2L0 1181 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CACNG4Q9UBN1 327 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ADAM28Q9UKQ2 775 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 EXOC7Q9UPT5 735 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 PRG3Q9Y2Y8 225 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF318Q5VUA4 2279 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SF3B1O75533 1304 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 A0A1W2PP11 408 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CTAGE9A4FU28 777 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 URADA6NGE7 173 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CASTOR2A6NHX0 329 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 LRRC72A6NJI9 287 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 C15orf62A8K5M9 175 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 PDE9AO76083 593 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CTAGE8P0CG41 777 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 ANXA7P20073 488 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CYP3A5P20815 502 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 RPL9P32969 192 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CDKN1AP38936 164 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 MATR3P43243 847 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 ACOT2P49753 483 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CTSCP53634 463 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CSE1LP55060 971 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 SNRPFP62306 86 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 ELAVL2Q12926 359 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 TRAT1Q6PIZ9 186 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 RAD9BQ6WBX8 426 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CFAP77Q6ZQR2 320 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 RBPMS2Q6ZRY4 209 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CLEC17AQ6ZS10 378 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 STXBP4Q6ZWJ1 553 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 MARK2Q7KZI7 788 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 GLRX5Q86SX6 157 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CTAGE4Q8IX94 777 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 EFCAB13Q8IY85 973 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CIARTQ8N365 385 aaPredicted RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 SLC5A8Q8N695 610 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 XXYLT1Q8NBI6 393 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 SLC38A9Q8NBW4 561 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 MOSPD2Q8NHP6 518 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 TRPC4APQ8TEL6 797 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 GRK7Q8WTQ7 553 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 C18orf25Q96B23 403 aaPredicted RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 EGLN2Q96KS0 407 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 OR2A14Q96R47 310 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 SMC6Q96SB8 1091 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 PAFAH2Q99487 392 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 SRSF8Q9BRL6 282 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 CBWD1Q9BRT8 395 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 NAA11Q9BSU3 229 aaPredicted RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 SLC25A23Q9BV35 468 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 ASB7Q9H672 318 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 TLE6Q9H808 572 aa4.55□□□□□ -1.68
LINC00254-201ENST00000563416 RPF1Q9H9Y2 349 aaKnown RBP4.55□□□□□ -1.68
LINC00254-201ENST00000563416 MBNL1Q9NR56 388 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms