RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CLDN16Q9Y5I7 305 aa7.13□□□□□ -1.27
HERPUD1-206ENST00000563343 MED12Q93074 2177 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 SVEP1Q4LDE5 3571 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TGP01266 2768 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 A0A087X1B8 175 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 SH3D21A4FU49 640 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 A8MUA0 341 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 A8MVJ9 347 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 DEFB108AA8MXU0 73 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TGFBR3LH3BV60 316 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 KPNA5O15131 536 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 GALR3O60755 368 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 B4GALT2O60909 372 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 OR2J2O76002 312 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 RFPL3SP0C7P2 107 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 RBP3P10745 1247 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 PAX1P15863 534 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 RPS3P23396 243 aaKnown RBP eCLIP7.12□□□□□ -1.272e-6■■■□□ 15.5
HERPUD1-206ENST00000563343 JAK1P23458 1154 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 GUCA2AQ02747 115 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 HYAL2Q12891 473 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TSTA3Q13630 321 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 KCNJ11Q14654 390 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TCEAL1Q15170 157 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TERF2Q15554 542 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ACKR1Q16570 336 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 STX1AQ16623 288 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 PARP6Q2NL67 630 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 MSS51Q4VC12 460 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 FASTKD1Q53R41 847 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 CTSL3PQ5NE16 218 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 PTRHD1Q6GMV3 140 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ASPGQ86U10 573 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 LACC1Q8IV20 430 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 CDKL3Q8IVW4 592 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 KATNAL2Q8IYT4 538 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 CAMKVQ8NCB2 501 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 FBXO15Q8NCQ5 510 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ZNF740Q8NDX6 193 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 OR52K1Q8NGK4 314 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 SKA2Q8WVK7 121 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ISL2Q96A47 359 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 VMP1Q96GC9 406 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 SCYL1Q96KG9 808 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 BIRC8Q96P09 236 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ALS2CR12Q96Q35 445 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TTC1Q99614 292 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 CCL19Q99731 98 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 FAM118BQ9BPY3 351 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 HEMGNQ9BXL5 484 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 SLC6A15Q9H2J7 730 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 LDAHQ9H6V9 325 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ZNF703Q9H7S9 590 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 LRRC40Q9H9A6 602 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 PRDM9Q9NQV7 894 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 HPF1Q9NWY4 346 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ZFATQ9P243 1243 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 GALPQ9UBC7 116 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 MYOTQ9UBF9 498 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 FBXW2Q9UKT8 454 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 TESMINQ9Y4I5 508 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ATG4BQ9Y4P1 393 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 ROS1P08922 2347 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.12□□□□□ -1.274e-7■■■□□ 16.2
HERPUD1-206ENST00000563343 TENM1Q9UKZ4 2725 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 DYSFO75923 2080 aa7.12□□□□□ -1.27
HERPUD1-206ENST00000563343 MBD3L3A6NE82 208 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 AHRRA9YTQ3 701 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 RNF223E7ERA6 249 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 CES2O00748 559 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 NIPSNAP2O75323 286 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ZFAND5O76080 213 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 MYO1DO94832 1006 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 SIX3O95343 332 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 IL18BPO95998 194 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 IL2RAP01589 272 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 GYPCP04921 128 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 CCL3P10147 92 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 LOXP28300 417 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 IMPA1P29218 277 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 PPP2R1BP30154 601 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 HSD17B2P37059 387 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 AGFG1P52594 562 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 EIF3EP60228 445 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 CRYZQ08257 329 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 TNK1Q13470 666 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 RPS6KA1Q15418 735 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 KLHL38Q2WGJ6 581 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ACSBG2Q5FVE4 666 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 KIAA0930Q6ICG6 404 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 RTL4Q6ZR62 310 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 ABHD13Q7L211 337 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 RHOT2Q8IXI1 618 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 RCOR2Q8IZ40 523 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 LRRC25Q8N386 305 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 GOLM1Q8NBJ4 401 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 MAPK1IP1LQ8NDC0 245 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 OR6P1Q8NGX9 317 aa7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 MBD3L2Q8NHZ7 208 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-206ENST00000563343 NEIL3Q8TAT5 605 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms