RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TIMP2P16035 220 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 CBLP22681 906 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 SOX6P35712 828 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 ETV3P41162 512 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 PIK3CBP42338 1070 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 UGT2B15P54855 530 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
USB1-207ENST00000563149 C2orf80Q0P641 193 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 TMEM115Q12893 351 aaPredicted RBP12.54□□□□□ -0.4
USB1-207ENST00000563149 MAPK11Q15759 364 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 CCSMST1Q4G0I0 132 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 LRRC73Q5JTD7 316 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 COLEC12Q5KU26 742 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 COX20Q5RI15 118 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 FAM71E1Q6IPT2 247 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 CNKSR3Q6P9H4 555 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 C19orf48Q6RUI8 117 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 ANGPTL8Q6UXH0 198 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 DSG4Q86SJ6 1040 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 TMPRSS11BQ86T26 416 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
USB1-207ENST00000563149 RASGEF1AQ8N9B8 481 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 POC5Q8NA72 575 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 GPR156Q8NFN8 814 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 NFKBIDQ8NI38 313 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
USB1-207ENST00000563149 C16orf78Q8WTQ4 265 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 NEIL2Q969S2 332 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
USB1-207ENST00000563149 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 ACER3Q9NUN7 267 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 TAS2R9Q9NYW1 312 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 ZNF451Q9Y4E5 1061 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 HTR3EA5X5Y0 456 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 ZAR1LA6NP61 321 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 LOC110117498-PIK3R3F6TDL0 507 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 HAT1O14929 419 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 TLL1O43897 1013 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 GADD45GO95257 159 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 C1orf105O95561 183 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 OPN1SWP03999 348 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 RB1P06400 928 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CTSCP53634 463 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 FPGSQ05932 587 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 ZNF852Q6ZMS4 543 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 IKBIPQ70UQ0 350 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 DEFB128Q7Z7B8 93 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 KIAA0907Q7Z7F0 614 aaPredicted RBP12.53□□□□□ -0.4
USB1-207ENST00000563149 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
USB1-207ENST00000563149 METTL4Q8N3J2 472 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 NATD1Q8N6N6 113 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 AUTS2Q8WXX7 1259 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PIK3R3Q92569 461 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 UBE2E3Q969T4 207 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PPP1R16AQ96I34 528 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 SGPP1Q9BX95 441 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CFHR5Q9BXR6 569 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 SLC46A2Q9BY10 475 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 DMRT3Q9NQL9 472 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 RLIMQ9NVW2 624 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 GPR83Q9NYM4 423 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 ICKQ9UPZ9 632 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PRAMEF25A6NGN4 478 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 H3BM21 787 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PSMD11O00231 422 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 TBX1O43435 398 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 LEFTY1O75610 366 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PTHP01270 115 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 NPPBP16860 134 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 XPAP23025 273 aaPredicted RBP12.53□□□□□ -0.4
USB1-207ENST00000563149 CHMP24386 653 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CHI3L1P36222 383 aaPredicted RBP12.53□□□□□ -0.4
USB1-207ENST00000563149 NNMTP40261 264 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 OR1E2P47887 323 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PREPP48147 710 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CRISP1P54107 249 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 DEFA1P59665 94 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 DEFA3P59666 94 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 CD300CQ08708 224 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 SLBPQ14493 270 aaKnown RBP eCLIP12.53□□□□□ -0.4
USB1-207ENST00000563149 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
USB1-207ENST00000563149 BCL2A1Q16548 175 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 ADNP2Q6IQ32 1131 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 TMEM220Q6QAJ8 160 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
USB1-207ENST00000563149 OR4K1Q8NGD4 311 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms