RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 BST1Q10588 318 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 DSG2Q14126 1118 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 HIST2H2ACQ16777 129 aaPredicted RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 UGT3A2Q3SY77 523 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 CFAP157Q5JU67 520 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 MANEAQ5SRI9 462 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 DEPDC1Q5TB30 811 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 KHDRBS2Q5VWX1 349 aaKnown RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 HIST2H2AA3Q6FI13 130 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 OVCH1Q7RTY7 1134 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 PRSS58Q8IYP2 241 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 CA13Q8N1Q1 262 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 TBC1D19Q8N5T2 526 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 TTLQ8NG68 377 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 OR2L5Q8NG80 312 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 METTL6Q8TCB7 284 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 SELENOMQ8WWX9 145 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 UCN3Q969E3 161 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 GAL3ST3Q96A11 431 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 CNDP1Q96KN2 507 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 CSF3RQ99062 836 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 MRPL1Q9BYD6 325 aaKnown RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 ACPTQ9BZG2 426 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 REXO4Q9GZR2 422 aaKnown RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 STMN4Q9H169 189 aaPredicted RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 SOX17Q9H6I2 414 aaPredicted RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 GPN2Q9H9Y4 310 aaPredicted RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 ANKHQ9HCJ1 492 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 GIMAP2Q9UG22 337 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 PCDHGA11Q9Y5H2 935 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 NBEAQ8NFP9 2946 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 IGLV3-12A0A075B6K2 115 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 HMGB1P1B2RPK0 211 aaPredicted RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 H0YIG0 161 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 TGFBR3LH3BV60 316 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 TXNDC9O14530 226 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 CHST10O43529 356 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 TMPRSS11DO60235 418 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 PRKRAO75569 313 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 MLYCDO95822 493 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 GBAP04062 536 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 SERPINE1P05121 402 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 ENO1P06733 434 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 AGXTP21549 392 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 ATP5A1P25705 553 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 GSTM2P28161 218 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 PTPN4P29074 926 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 HMOX2P30519 316 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 RAE1P78406 368 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 HMGCS1Q01581 520 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 GALNT1Q10472 559 aaPredicted RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 TBL3Q12788 808 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 NDUFA9Q16795 377 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 HHATQ5VTY9 493 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 KANK2Q63ZY3 851 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 TTC19Q6DKK2 380 aaPredicted RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 PRMT9Q6P2P2 845 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 C19orf48Q6RUI8 117 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 ZNF781Q8N8C0 355 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 OR2T11Q8NH01 316 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 OR51Q1Q8NH59 317 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 STT3BQ8TCJ2 826 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 ADAMTS17Q8TE56 1095 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 STARD8Q92502 1023 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 UBE2E3Q969T4 207 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 MVB12AQ96EY5 273 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 CMTM7Q96FZ5 175 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 PEX11GQ96HA9 241 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 SEC16BQ96JE7 1060 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 CCNL2Q96S94 520 aaPredicted RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 MAPKAP1Q9BPZ7 522 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 NLNQ9BYT8 704 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 SLC29A3Q9BZD2 475 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 DPH1Q9BZG8 443 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 SLC26A1Q9H2B4 701 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 ELOVL6Q9H5J4 265 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 LANCL2Q9NS86 450 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 IFT80Q9P2H3 777 aaPredicted RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 TRPC4Q9UBN4 977 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 FARSAQ9Y285 508 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 PTRH2Q9Y3E5 179 aaKnown RBP9.25□□□□□ -0.93
CLK3-208ENST00000562626 CCL27Q9Y4X3 112 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 PCDHGA6Q9Y5G7 932 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 CLDN16Q9Y5I7 305 aa9.25□□□□□ -0.93
CLK3-208ENST00000562626 A0A0A6YYD5 115 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 ARHGAP10A1A4S6 786 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 WASHC1A8K0Z3 465 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 FOXE1O00358 373 aaPredicted RBP9.24□□□□□ -0.93
CLK3-208ENST00000562626 AZIN1O14977 448 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 ALOX12BO75342 701 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 CREG1O75629 220 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 CDC123O75794 336 aaPredicted RBP9.24□□□□□ -0.93
CLK3-208ENST00000562626 SCELO95171 688 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 BMP10O95393 424 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 RECKO95980 971 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 RAB40ALP0C0E4 278 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 ZGLP1P0C6A0 271 aa9.24□□□□□ -0.93
CLK3-208ENST00000562626 TPP2P29144 1249 aaPredicted RBP9.24□□□□□ -0.93
CLK3-208ENST00000562626 XCR1P46094 333 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms