RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MGRN1O60291 552 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 PDE5AO76074 875 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 GBAP04062 536 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 IL3P08700 152 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 DRD2P14416 443 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 DDCP20711 480 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 SLC6A2P23975 617 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 ATP5A1P25705 553 aaKnown RBP13.59□□□□□ -0.23
COMMD4-205ENST00000562310 ALDH4A1P30038 563 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 MPLP40238 635 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 EEFSECP57772 596 aaKnown RBP13.59□□□□□ -0.23
COMMD4-205ENST00000562310 ARF3P61204 181 aaPredicted RBP13.59□□□□□ -0.23
COMMD4-205ENST00000562310 SLC9A5Q14940 896 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 INAVAQ3KP66 663 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 LRIF1Q5T3J3 769 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 C1orf146Q5VVC0 180 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 OR4F3Q6IEY1 312 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 DLEU7Q6UYE1 221 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 GATAD2AQ86YP4 633 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 JADE3Q92613 823 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 PPM1MQ96MI6 270 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 CCDC115Q96NT0 180 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 TEFMQ96QE5 360 aaKnown RBP13.59□□□□□ -0.23
COMMD4-205ENST00000562310 AICDAQ9GZX7 198 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 RASSF4Q9H2L5 321 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 KLHL31Q9H511 634 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 DENND2DQ9H6A0 471 aaPredicted RBP13.59□□□□□ -0.23
COMMD4-205ENST00000562310 IL21RQ9HBE5 538 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 BTNL2Q9UIR0 455 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 MN1Q10571 1320 aaPredicted RBP13.59□□□□□ -0.23
COMMD4-205ENST00000562310 PIEZO1Q92508 2521 aa13.58□□□□□ -0.23
COMMD4-205ENST00000562310 SDK1Q7Z5N4 2213 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 PRSS51A0A1B0GVH4 220 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SLC9B1P1A6NJY1 282 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 RNASET2O00584 256 aaKnown RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 RFXANKO14593 260 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 P2RX6O15547 441 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SRPX2O60687 465 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 KLHL18O94889 574 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 ZBTB11O95625 1053 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 STAMBPO95630 424 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 C9P02748 559 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 FAM58BPP0C7Q3 252 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 ZNF883P0CG24 379 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 PIM1P11309 404 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 HSD17B1P14061 328 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 OR1D5P58170 312 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SKP1P63208 163 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 PHC1P78364 1004 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 BNIP2Q12982 314 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 CEACAM7Q14002 265 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 CAPRIN1Q14444 709 aaKnown RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 WDR74Q6RFH5 385 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 ZNF793Q6ZN11 406 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 FAM92BQ6ZTR7 304 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SPRED1Q7Z699 444 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 HPS6Q86YV9 775 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 C10orf67Q8IYJ2 551 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 CSNK1A1LQ8N752 337 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 ACOT4Q8N9L9 421 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 UTP15Q8TED0 518 aaKnown RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 NCSTNQ92542 709 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 CCDC74AQ96AQ1 378 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 TMEM125Q96AQ2 219 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 TM4SF18Q96CE8 201 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 CCDC124Q96CT7 223 aaKnown RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 TGM7Q96PF1 710 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 FCRL4Q96PJ5 515 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 GBP5Q96PP8 586 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SERINC2Q96SA4 455 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 MAP3K3Q99759 626 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 KLHL25Q9H0H3 589 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 MUC13Q9H3R2 512 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SYNPO2LQ9H987 977 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SERHLQ9NQF3 203 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 PRDM7Q9NQW5 492 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 SH3BP4Q9P0V3 963 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 PHF11Q9UIL8 331 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 EXO1Q9UQ84 846 aaKnown RBP13.58□□□□□ -0.24
COMMD4-205ENST00000562310 PCDHA9Q9Y5H5 950 aa13.58□□□□□ -0.24
COMMD4-205ENST00000562310 TRBV5-3A0A0A0MS03 114 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 NME4O00746 187 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 KHNYNO15037 678 aaKnown RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 TMPRSS11DO60235 418 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 SCN2BO60939 215 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 LMNAP02545 664 aaKnown RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 STATHP02808 62 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 ZNF888P0CJ79 500 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 LAMP1P11279 417 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 DUSP3P51452 185 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 GFERP55789 205 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms