RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 HOXB2P14652 356 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 DDCP20711 480 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 FPR1P21462 350 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 IGFBP5P24593 272 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 AQP1P29972 269 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 PKLRP30613 574 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 CHI3L1P36222 383 aaPredicted RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 CDK9P50750 372 aaKnown RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 MAPK12P53778 367 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 KCNJ10P78508 379 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 RBBP4Q09028 425 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 FADDQ13158 208 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 CLCA4Q14CN2 919 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 ZBED5Q49AG3 693 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 RBM48Q5RL73 367 aaKnown RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 ADGRF3Q8IZF5 1079 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 IL17RCQ8NAC3 791 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 OR2L8Q8NGY9 312 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 HDAC2Q92769 488 aaKnown RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 NRBF2Q96F24 287 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 MPP4Q96JB8 637 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 QRFPRQ96P65 431 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 RAB11FIP5Q9BXF6 653 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 PREBQ9HCU5 417 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 LTB4R2Q9NPC1 389 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 FZD3Q9NPG1 666 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 MOSPD1Q9UJG1 213 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 ICKQ9UPZ9 632 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 PCDHGA8Q9Y5G5 932 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 A0A1W2PQF6 199 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 TMEM229AB2RXF0 380 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 CACNB4O00305 520 aaPredicted RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 SLC16A6O15403 523 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 DPM1O60762 260 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 KRT75O95678 551 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 EGFP01133 1207 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 ITGAMP11215 1152 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 MAT2AP31153 395 aaKnown RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 CTHP32929 405 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 SOAT1P35610 550 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 CASP9P55211 416 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 CSNK1G2P78368 415 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 IL18R1Q13478 541 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 HTR4Q13639 388 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 IQCCQ4KMZ1 466 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 TRIM40Q6P9F5 258 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 ZNF773Q6PK81 442 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 TM4SF18Q96CE8 201 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 C7orf34Q96L11 122 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 DOHHQ9BU89 302 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 XKR8Q9H6D3 395 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 TMEM38AQ9H6F2 299 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 C1GALT1Q9NS00 363 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 DDX18Q9NVP1 670 aaKnown RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 GPSM3Q9Y4H4 160 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 COL4A2P08572 1712 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3DA0A087WVF3 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3IA0A087WXS9 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3EA0A087X179 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3KA0A087X1G2 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3FA6NER0 549 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3LB9A6J9 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 NDUFS4O43181 175 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 OR1F1O43749 312 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 KLF8O95600 359 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3HP0C7X1 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 SLC5A2P31639 672 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 SELENOWP63302 87 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PRDX1Q06830 199 aaKnown RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 SCARB2Q14108 478 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 KRT33BQ14525 404 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 LAPTM4AQ15012 233 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3GQ6DHY5 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3CQ6IPX1 549 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 CYP4Z1Q86W10 505 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 NUDT13Q86X67 352 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 RNF130Q86XS8 419 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 TBC1D3Q8IZP1 549 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 NATD1Q8N6N6 113 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 OR2A1Q8NGT9 310 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 OR5AK3PQ8NH89 298 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 NFKBIDQ8NI38 313 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 RGMAQ96B86 450 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 MYOCQ99972 504 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 MVB12BQ9H7P6 319 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 REEP1Q9H902 201 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 LHX9Q9NQ69 397 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PADI2Q9Y2J8 665 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 SAMHD1Q9Y3Z3 626 aaKnown RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 IGKV1-8A0A0C4DH67 115 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PDZK1P1A8MUH7 402 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 SLC31A1O15431 190 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 MITFO75030 526 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 IL7RP16871 459 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 UQCRC2P22695 453 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 CRHBPP24387 322 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 GSTM5P46439 218 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms