RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 OR2L5Q8NG80 312 aa14.56□□□□□ -0.08
CCDC113-203ENST00000561517 UHMK1Q8TAS1 419 aaKnown RBP14.56□□□□□ -0.08
CCDC113-203ENST00000561517 DNAJB14Q8TBM8 379 aa14.56□□□□□ -0.08
CCDC113-203ENST00000561517 TSLPQ969D9 159 aa14.56□□□□□ -0.08
CCDC113-203ENST00000561517 NPLQ9BXD5 320 aaPredicted RBP14.56□□□□□ -0.08
CCDC113-203ENST00000561517 VPS11Q9H270 941 aa14.56□□□□□ -0.08
CCDC113-203ENST00000561517 PTGFRNQ9P2B2 879 aa14.56□□□□□ -0.08
CCDC113-203ENST00000561517 PCDHGA10Q9Y5H3 936 aa14.56□□□□□ -0.08
CCDC113-203ENST00000561517 SPENQ96T58 3664 aaKnown RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 IGKV3D-11A0A0A0MRZ8 115 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 CLEC18AA5D8T8 446 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 B4GALT2O60909 372 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 RHOXF2BP0C7M4 288 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 COL6A2P12110 1019 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 GFAPP14136 432 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 EPB42P16452 691 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 RUNX2Q13950 521 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 PCBP2Q15366 365 aaKnown RBP eCLIP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 EXT1Q16394 746 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 PFKFB4Q16877 469 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 SFT2D3Q587I9 215 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 B3GNTL1Q67FW5 361 aaPredicted RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 H3F3CQ6NXT2 135 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 METTL2BQ6P1Q9 378 aaKnown RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 ABHD17CQ6PCB6 329 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 CLEC18BQ6UXF7 455 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 CLEC18CQ8NCF0 446 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 LRRN4CLQ8ND94 238 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 M1APQ8TC57 530 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 ZNF473Q8WTR7 871 aaKnown RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 HAS2Q92819 552 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 UBE2E3Q969T4 207 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 SNRNP40Q96DI7 357 aaKnown RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 FAR2Q96K12 515 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 RHOXF2Q9BQY4 288 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 TXLNGYQ9BZA5 131 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 REXO4Q9GZR2 422 aaKnown RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 ZNF358Q9NW07 568 aa14.55□□□□□ -0.08
CCDC113-203ENST00000561517 SPTAN1Q13813 2472 aaKnown RBP14.55□□□□□ -0.08
CCDC113-203ENST00000561517 A0A088AWK7 358 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 A0A0G2JN53 185 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TRIM49D1C9J1S8 452 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 FAM227AF5H4B4 570 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PSMD12O00232 456 aaPredicted RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 RIPK2O43353 540 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PRMT3O60678 531 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 VPS4BO75351 444 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 RBP1P09455 135 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 FAM153BP0C7A2 387 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 ZNF10P21506 573 aaPredicted RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 GCAP28676 217 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 SERPINB1P30740 379 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TSFMP43897 325 aaKnown RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PLA2G16P53816 162 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 OR4D2P58180 307 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 BTG2P78543 158 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 ZNF169Q14929 603 aaPredicted RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TLR1Q15399 786 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TSNAXIP1Q2TAA8 658 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 BTBD16Q32M84 506 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 FAM153CQ494X1 144 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 GRHL2Q6ISB3 625 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 MED27Q6P2C8 311 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TRIM40Q6P9F5 258 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PAPD4Q6PIY7 484 aaKnown RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 CISD2Q8N5K1 135 aaKnown RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TEX9Q8N6V9 391 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 OR7G3Q8NG95 312 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 C19orf60Q96EN9 201 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PTCHD1Q96NR3 888 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 LPAR4Q99677 370 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 BARD1Q99728 777 aaKnown RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 MS4A8Q9BY19 250 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 RNF32Q9H0A6 362 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 L2HGDHQ9H9P8 463 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 MMP25Q9NPA2 562 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PRDM9Q9NQV7 894 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 PRDM7Q9NQW5 492 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 VPS4AQ9UN37 437 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TSC22D4Q9Y3Q8 395 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 MMACHCQ9Y4U1 282 aa14.54□□□□□ -0.08
CCDC113-203ENST00000561517 TNPO3Q9Y5L0 923 aaKnown RBP14.54□□□□□ -0.08
CCDC113-203ENST00000561517 DIDO1Q9BTC0 2240 aaKnown RBP14.53□□□□□ -0.08
CCDC113-203ENST00000561517 EXOC1LA0A1B0GW35 172 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 TCRBV16S1A1N1A0A5B0 115 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 DYTNA2CJ06 578 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 LRRC14BA6NHZ5 514 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 B3GALT2O43825 422 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 SNRPAP09012 282 aaKnown RBP14.53□□□□□ -0.08
CCDC113-203ENST00000561517 MTTPP55157 894 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 RAB38P57729 211 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 ACTN3Q08043 901 aaPredicted RBP14.53□□□□□ -0.08
CCDC113-203ENST00000561517 TGM3Q08188 693 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 LIPJQ5W064 366 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 ADGRD1Q6QNK2 874 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 TIFABQ6ZNK6 161 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 UBE3DQ7Z6J8 389 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 SCUBE1Q8IWY4 988 aa14.53□□□□□ -0.08
CCDC113-203ENST00000561517 EIF1ADQ8N9N8 165 aaKnown RBP14.53□□□□□ -0.08
CCDC113-203ENST00000561517 CATSPER1Q8NEC5 780 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms