RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 RAP1GDS1P52306 607 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 ARFIP1P53367 373 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 PCBP4P57723 403 aaKnown RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 SKP1P63208 163 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 CSTF3Q12996 717 aaKnown RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 SLC9A5Q14940 896 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 SYT16Q17RD7 645 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 MLIPQ5VWP3 458 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 NIPAL1Q6NVV3 410 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 OVCH1Q7RTY7 1134 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 SHISA5Q8N114 240 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 GBP7Q8N8V2 638 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 AMER3Q8N944 861 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 ZNF248Q8NDW4 579 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 FAM76AQ8TAV0 307 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 NAF1Q96HR8 494 aaKnown RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 QRFPRQ96P65 431 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 KCNC2Q96PR1 638 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 CENPKQ9BS16 269 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 TBCDQ9BTW9 1192 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 SORBS1Q9BX66 1292 aaKnown RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 MRPL1Q9BYD6 325 aaKnown RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 CHST8Q9H2A9 424 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 TUBB1Q9H4B7 451 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 SLC22A11Q9NSA0 550 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 AHSPQ9NZD4 102 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 IFT80Q9P2H3 777 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 GPN3Q9UHW5 284 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-221ENST00000561276 HAO1Q9UJM8 370 aa9.74□□□□□ -0.85
LRRC28-221ENST00000561276 NUP210LQ5VU65 1888 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 A0A088AWK7 358 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 LOC101059948A0A1B0GTJ6 334 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ZNF860A6NHJ4 632 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 SLC28A1O00337 649 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 CHST10O43529 356 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 RDH16O75452 317 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 KITP10721 976 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ZNF10P21506 573 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 FBLP22087 321 aaKnown RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ATP5A1P25705 553 aaKnown RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 BSGP35613 385 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 DLSTP36957 453 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 STAT5AP42229 794 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 SSR2P43308 183 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 TSFMP43897 325 aaKnown RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 MTTPP55157 894 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 OLR1P78380 273 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 MAT1AQ00266 395 aaKnown RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 HMGCS1Q01581 520 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 OCRLQ01968 901 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 GUCY1A3Q02108 690 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 BTKQ06187 659 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 RUNX2Q13950 521 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 IMPG1Q17R60 797 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 VWA2Q5GFL6 755 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 SPDYAQ5MJ70 313 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ZNF793Q6ZN11 406 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 RNF165Q6ZSG1 346 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 Q6ZSR9 355 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 COX15Q7KZN9 410 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 DDIASQ8IXT1 998 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 METTL4Q8N3J2 472 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ACOT4Q8N9L9 421 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 OR5T3Q8NGG3 340 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 OR51Q1Q8NH59 317 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 SNIP1Q8TAD8 396 aaKnown RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 CT55Q8WUE5 264 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 CHTF18Q8WVB6 975 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 TWIST2Q8WVJ9 160 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 SERINC2Q96SA4 455 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ACPTQ9BZG2 426 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 DPH1Q9BZG8 443 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ROGDIQ9GZN7 287 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 COPS7BQ9H9Q2 264 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 CLK4Q9HAZ1 481 aaKnown RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 SLCO1B3Q9NPD5 702 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 TRPC4Q9UBN4 977 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ZNF282Q9UDV7 671 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-221ENST00000561276 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 CCL27Q9Y4X3 112 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 PTGDR2Q9Y5Y4 395 aa9.73□□□□□ -0.85
LRRC28-221ENST00000561276 ATP6AP2A0A1C7CYW4 349 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 C9J4A7 227 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 PIP5K1BO14986 540 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 KLK10O43240 276 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 RGS14O43566 566 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 B3GALT2O43825 422 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 SEC22BO75396 215 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 EEDO75530 441 aaKnown RBP9.72□□□□□ -0.85
LRRC28-221ENST00000561276 SKAP2O75563 359 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-221ENST00000561276 ATP6AP2O75787 350 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 SEMA3DO95025 777 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 ALBP02768 609 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 GBAP04062 536 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 KLK1P06870 262 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 CD63P08962 238 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 RAB40ALP0C0E4 278 aa9.72□□□□□ -0.85
LRRC28-221ENST00000561276 HIST1H1TP22492 207 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-221ENST00000561276 F8A1P23610 371 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms