RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 IGHV1-45A0A0A0MS14 117 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 MAGEB17A8MXT2 336 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 H0YIV9 168 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 PEX12O00623 359 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 PLIN3O60664 434 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 B4GALT2O60909 372 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 IGHEP01854 428 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 FHP07954 510 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 GSTA1P08263 222 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 ACPPP15309 386 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 KRT4P19013 534 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 CRHR1P34998 444 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 CD97P48960 835 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 PRKAA2P54646 552 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 STXBP1P61764 594 aaKnown RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 RPS13P62277 151 aaKnown RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 ZRSR2Q15696 482 aaKnown RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 TUBB8Q3ZCM7 444 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 PAGE2BQ5JRK9 111 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 TCHHL1Q5QJ38 904 aaPredicted RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 MFSD4BQ5TF39 518 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 HIST2H2AA3Q6FI13 130 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 TCTN3Q6NUS6 607 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 METTL2BQ6P1Q9 378 aaKnown RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 ANKRD37Q7Z713 158 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 GALNT16Q8N428 558 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 OR4F6Q8NGB9 312 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 TRPC4APQ8TEL6 797 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 IP6K3Q96PC2 410 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 CSF3RQ99062 836 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 SLC25A23Q9BV35 468 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 RRAGDQ9NQL2 400 aaPredicted RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 DMRT3Q9NQL9 472 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 NECTIN3Q9NQS3 549 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
TPM1-230ENST00000561266 KCMF1Q9P0J7 381 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 DCDC2Q9UHG0 476 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 TMCO1Q9UM00 188 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 ZNF462Q96JM2 2506 aa13.09□□□□□ -0.31
TPM1-230ENST00000561266 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 MYOCOSA0A1B0GUC4 107 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 A0A1W2PQ72 361 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 MKRN2OSH3BPM6 223 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 UBFD1O14562 309 aaKnown RBP13.08□□□□□ -0.32
TPM1-230ENST00000561266 UGDHO60701 494 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 GLRA3O75311 464 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 OR4F21O95013 312 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 CLDN9O95484 217 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 IMPDH1P20839 514 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 ATP5F1P24539 256 aaPredicted RBP13.08□□□□□ -0.32
TPM1-230ENST00000561266 ATP5A1P25705 553 aaKnown RBP13.08□□□□□ -0.32
TPM1-230ENST00000561266 GSTM2P28161 218 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 CCNG1P51959 295 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 SOX8P57073 446 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 HERVK_113P63132 956 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 CLCQ05315 142 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
TPM1-230ENST00000561266 DEPDC1Q5TB30 811 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 ZYG11AQ6WRX3 759 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 LCA5Q86VQ0 697 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 PLPP5Q8NEB5 264 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 PSMF1Q92530 271 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 TBC1D20Q96BZ9 403 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 SEC16BQ96JE7 1060 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 IMMP1LQ96LU5 166 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 MAPKAP1Q9BPZ7 522 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 TMEM109Q9BVC6 243 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 ERVK-6Q9BXR3 956 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 ZNF700Q9H0M5 742 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 PPCSQ9HAB8 311 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 TNFRSF12AQ9NP84 129 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 TSC22D4Q9Y3Q8 395 aa13.08□□□□□ -0.32
TPM1-230ENST00000561266 PCDHGA9Q9Y5G4 932 aaKnown RBP13.08□□□□□ -0.32
TPM1-230ENST00000561266 URADA6NGE7 173 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 PYCARD-AS1I3L0S3 204 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 CYR61O00622 381 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 PLPP1O14494 284 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 SPAG7O75391 227 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
TPM1-230ENST00000561266 SUPT7LO94864 414 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 HPP00738 406 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 C8orf89P0DMQ9 161 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 RNH1P13489 461 aaKnown RBP13.07□□□□□ -0.32
TPM1-230ENST00000561266 MAOAP21397 527 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 RRADP55042 308 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 LIM2P55344 173 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 KHDRBS2Q5VWX1 349 aaKnown RBP13.07□□□□□ -0.32
TPM1-230ENST00000561266 TRIM40Q6P9F5 258 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 ASB18Q6ZVZ8 466 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 NDUFAF7Q7L592 441 aa13.07□□□□□ -0.32
TPM1-230ENST00000561266 CPEB2Q7Z5Q1 589 aaKnown RBP13.07□□□□□ -0.32
TPM1-230ENST00000561266 MILR1Q7Z6M3 343 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms