RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CATSPER2Q96P56 530 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 IP6K3Q96PC2 410 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 KCNC2Q96PR1 638 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 OR1F2PQ96R84 312 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 F2RL3Q96RI0 385 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 SERINC2Q96SA4 455 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 MTERF1Q99551 399 aaKnown RBP9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 SERPINI1Q99574 410 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 MECRQ9BV79 373 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 DDX31Q9H8H2 851 aaKnown RBP9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 CPNE5Q9HCH3 593 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 MID1IP1Q9NPA3 183 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 CTSFQ9UBX1 484 aa9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 MRPS18BQ9Y676 258 aaKnown RBP9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 TNRC6AQ8NDV7 1962 aaKnown RBP9.11□□□□□ -0.95
RABGGTA-221ENST00000561055 A0A1W2PQ72 361 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 TMEM120BA0PK00 339 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 HMGB1P1B2RPK0 211 aaPredicted RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 NPIPB8E9PQR5 432 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 SGK494L7N484 410 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 MANBAO00462 879 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 PLPP1O14494 284 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 CHST10O43529 356 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 SASH3O75995 380 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ETHE1O95571 254 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 PDYNP01213 254 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 KRT6AP02538 564 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 KRT6BP04259 564 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 UMODP07911 640 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 UROSP10746 265 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 MMP11P24347 488 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ATP5A1P25705 553 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 BSGP35613 385 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ARL1P40616 181 aaPredicted RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 FOLR3P41439 243 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 KRT6CP48668 564 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 NEK2P51955 445 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 MTTPP55157 894 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 RAB8AP61006 207 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 RPS18P62269 152 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 RPS13P62277 151 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 KLC1Q07866 573 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 CDC20Q12834 499 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 CSTF3Q12996 717 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 IFT88Q13099 833 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 IL10RAQ13651 578 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 RUNX2Q13950 521 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 RCN2Q14257 317 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 VWA2Q5GFL6 755 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 TTC19Q6DKK2 380 aaPredicted RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 OR4C11Q6IEV9 310 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 NUDCD3Q8IVD9 361 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ZC3H7AQ8IWR0 971 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ZCCHC7Q8N3Z6 543 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 METTL27Q8N6F8 245 aaPredicted RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 CDYL2Q8N8U2 506 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 GBP7Q8N8V2 638 aaPredicted RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 PLPP5Q8NEB5 264 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 METTL6Q8TCB7 284 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 CCT6BQ92526 530 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 MIEF2Q96C03 454 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 FAR2Q96K12 515 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 CENPKQ9BS16 269 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ZNF717Q9BY31 904 aaPredicted RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 OR51B5Q9H339 312 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ELOVL6Q9H5J4 265 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 LYRM4Q9HD34 91 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 KCNK9Q9NPC2 374 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ACSS2Q9NR19 701 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ZNF446Q9NWS9 450 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 NMRK1Q9NWW6 199 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 KCMF1Q9P0J7 381 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 TRPC4Q9UBN4 977 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 ADAM29Q9UKF5 820 aa9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 RALYQ9UKM9 306 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 PTRH2Q9Y3E5 179 aaKnown RBP9.1□□□□□ -0.95
RABGGTA-221ENST00000561055 LOC102723996A0A087X1L8 192 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 UQCRHLA0A096LP55 91 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 TMEM114B3SHH9 223 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 FFAR3O14843 346 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 NKX2-8O15522 239 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 GPR42O15529 346 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ATP8B1O43520 1251 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 B3GALT2O43825 422 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 DNAJB6O75190 326 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ULK1O75385 1050 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 RDH16O75452 317 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 B3GALT4O96024 378 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ITGB2P05107 769 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 UQCRHP07919 91 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 FURINP09958 794 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 RNH1P13489 461 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 HIST1H1TP22492 207 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 GRK2P25098 689 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 HMOX2P30519 316 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 ARRB2P32121 409 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 XCR1P46094 333 aa9.09□□□□□ -0.95
RABGGTA-221ENST00000561055 PLA2G16P53816 162 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms