RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 WISP3O95389 354 aaPredicted RBP15.17■□□□□ 0.02
SNX1-213ENST00000561026 GSTM2P28161 218 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 TRHRP34981 398 aaPredicted RBP15.17■□□□□ 0.02
SNX1-213ENST00000561026 CYB561P49447 251 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 SLC12A2P55011 1212 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 RUNX2Q13950 521 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 SLBPQ14493 270 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNX1-213ENST00000561026 TGFBIQ15582 683 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 C3AR1Q16581 482 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 CAPN12Q6ZSI9 719 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 ZNF227Q86WZ6 799 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 SPPL2CQ8IUH8 684 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 SIAH3Q8IW03 269 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 KRT78Q8N1N4 520 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 ARMC10Q8N2F6 343 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 FAM98AQ8NCA5 519 aaKnown RBP15.17■□□□□ 0.02
SNX1-213ENST00000561026 PYROXD1Q8WU10 500 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 GAL3ST3Q96A11 431 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 MS4A6EQ96DS6 147 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 SEC16BQ96JE7 1060 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 MAGED4Q96JG8 741 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 FAR2Q96K12 515 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 CAPS2Q9BXY5 557 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 UNKQ9C0B0 810 aaKnown RBP15.17■□□□□ 0.02
SNX1-213ENST00000561026 NT5DC2Q9H857 520 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 TINAGQ9UJW2 476 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 NPIPA1Q9UND3 350 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 MTO1Q9Y2Z2 717 aaKnown RBP15.17■□□□□ 0.02
SNX1-213ENST00000561026 MMACHCQ9Y4U1 282 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 APCP25054 2843 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 A8MUA0 341 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 ASNA1O43681 348 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 NME2P1O60361 137 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 NME2P22392 152 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 GRNP28799 593 aaKnown RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 SSTR1P30872 391 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 HNRNPH1P31943 449 aaKnown RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 GGT5P36269 586 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 HLCSP50747 726 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 MRPS25P82663 173 aaKnown RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 BNC2Q6ZN30 1099 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 Q6ZPB1 254 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 SCUBE1Q8IWY4 988 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 SPATA6LQ8N4H0 392 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 APCDD1LQ8NCL9 501 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 NPLQ9BXD5 320 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 DEFB126Q9BYW3 111 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 PITHD1Q9GZP4 211 aaPredicted RBP15.16■□□□□ 0.02
SNX1-213ENST00000561026 EHD1Q9H4M9 534 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 CAB39LQ9H9S4 337 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 GPRC5BQ9NZH0 403 aa15.16■□□□□ 0.02
SNX1-213ENST00000561026 A0A0G2JN53 185 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CXorf49A8MYA2 514 aaPredicted RBP15.15■□□□□ 0.02
SNX1-213ENST00000561026 FCHO1O14526 889 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 FANCGO15287 622 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 TAPBPO15533 448 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 ERI3O43414 337 aaKnown RBP15.15■□□□□ 0.02
SNX1-213ENST00000561026 CLEC3AO75596 197 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CCDC166P0CW27 439 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 ESRRAP11474 423 aaPredicted RBP15.15■□□□□ 0.02
SNX1-213ENST00000561026 HTR1EP28566 365 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 TERF2Q15554 542 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CDKL4Q5MAI5 379 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 XKRXQ6PP77 449 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CYS1Q717R9 158 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 GPSM1Q86YR5 675 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 SRRM1Q8IYB3 904 aaKnown RBP15.15■□□□□ 0.02
SNX1-213ENST00000561026 TCAIMQ8N3R3 496 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 B3GNT7Q8NFL0 401 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 ADAMTS18Q8TE60 1221 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CCT6BQ92526 530 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CDKL2Q92772 493 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 TSPAN17Q96FV3 270 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 PDLIM2Q96JY6 352 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 ERP44Q9BS26 406 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 TMEM79Q9BSE2 394 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 RUBCNLQ9H714 662 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 CNOT10Q9H9A5 744 aaKnown RBP15.15■□□□□ 0.02
SNX1-213ENST00000561026 SAYSD1Q9NPB0 183 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 WHRNQ9P202 907 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 TXNDC16Q9P2K2 825 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 PPIEQ9UNP9 301 aaKnown RBP15.15■□□□□ 0.02
SNX1-213ENST00000561026 CLDN16Q9Y5I7 305 aa15.15■□□□□ 0.02
SNX1-213ENST00000561026 A0A088AWK7 358 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 FAM187AA6NFU0 413 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 ANKDD1BA6NHY2 528 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 CLDN4O14493 209 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 EIF3HO15372 352 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX1-213ENST00000561026 PHGDHO43175 533 aaKnown RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 PRAMEF4O60810 478 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 MYO1DO94832 1006 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 TBX6O95947 436 aaPredicted RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 ZNF10P21506 573 aaPredicted RBP15.14■□□□□ 0.01
SNX1-213ENST00000561026 TNFRSF8P28908 595 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 CLCN2P51788 898 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 PLA2G16P53816 162 aa15.14■□□□□ 0.01
SNX1-213ENST00000561026 HSD17B7P56937 341 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms