RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 APCDD1LQ8NCL9 501 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 GOT1L1Q8NHS2 421 aaPredicted RBP9.23□□□□□ -0.93
TPM1-225ENST00000560679 MCOLN3Q8TDD5 553 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 IFT81Q8WYA0 676 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 LPGAT1Q92604 370 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 COX4I2Q96KJ9 171 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 SMC6Q96SB8 1091 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 SLC30A3Q99726 388 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 EBNA1BP2Q99848 306 aaKnown RBP9.23□□□□□ -0.93
TPM1-225ENST00000560679 SH3GL2Q99962 352 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 FAM114A2Q9NRY5 505 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 TREX1Q9NSU2 369 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 ZNF223Q9UK11 482 aaPredicted RBP9.23□□□□□ -0.93
TPM1-225ENST00000560679 ADAM21Q9UKJ8 722 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 NFU1Q9UMS0 254 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 ARHGAP21Q5T5U3 1957 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 IGKV3D-11A0A0A0MRZ8 115 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 TCRBV16S1A1N1A0A5B0 115 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ESYT3A0FGR9 886 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 OR14I1A6ND48 311 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 SLC16A5O15375 505 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ITGA10O75578 1167 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ZNF189O75820 626 aaPredicted RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 GLSO94925 669 aaPredicted RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 TJP3O95049 919 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 B3GALT4O96024 378 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 IGHG3P01860 377 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 CATP04040 527 aaKnown RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 IL10P22301 178 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 PCSK6P29122 969 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 IMPA1P29218 277 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 HSD17B2P37059 387 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 PPIAP62937 165 aaKnown RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 OLR1P78380 273 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 KLF1Q13351 362 aaPredicted RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 DHX34Q14147 1143 aaKnown RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 CHSY3Q70JA7 882 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 SLC26A11Q86WA9 606 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 CYP4X1Q8N118 509 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 CIARTQ8N365 385 aaPredicted RBP9.22□□□□□ -0.93
TPM1-225ENST00000560679 MPP5Q8N3R9 675 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 PSD4Q8NDX1 1056 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ZNF740Q8NDX6 193 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 OR2M7Q8NG81 312 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 GIMAP7Q8NHV1 300 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 SLC35B2Q8TB61 432 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 CREB3L4Q8TEY5 395 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 PEX13Q92968 403 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 TBC1D20Q96BZ9 403 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 RUNDC3BQ96NL0 473 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 DEFB126Q9BYW3 111 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 TTTY12Q9BZ98 90 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ATG10Q9H0Y0 220 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 PLEKHF2Q9H8W4 249 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ETNK1Q9HBU6 452 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 CHRAC1Q9NRG0 131 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 KCMF1Q9P0J7 381 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 ANAPC5Q9UJX4 755 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 SLC22A7Q9Y694 548 aa9.22□□□□□ -0.93
TPM1-225ENST00000560679 HIVEP2P31629 2446 aa9.21□□□□□ -0.93
TPM1-225ENST00000560679 TRBV11-1A0A0K0K1C0 115 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 A0A1W2PPR1 153 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 TCRBV7S2A1N4TA0A589 114 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 ZNF839A8K0R7 811 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 ERI2A8K979 691 aaKnown RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 G3V3Y1 287 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 SYT5O00445 386 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 BCKDKO14874 412 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 PRKNO60260 465 aaPredicted RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 LCMT2O60294 686 aaKnown RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 B4GALT2O60909 372 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 NDUFS3O75489 264 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 CELA3AP09093 270 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 CD53P19397 219 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 ENDOUP21128 410 aaKnown RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 MAOAP21397 527 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 FMO4P31512 558 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 UQCRC1P31930 480 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 SKIV2L2P42285 1042 aaKnown RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 MAGEA5P43359 124 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 DCAF7P61962 342 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 TBPL1P62380 186 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 BTG2P78543 158 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 CRADDP78560 199 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 DR1Q01658 176 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 DMTNQ08495 405 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 KEAP1Q14145 624 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 DAZAP2Q15038 168 aaPredicted RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 C1orf185Q5T7R7 199 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 PPP1R21Q6ZMI0 780 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 C16orf47Q6ZP98 133 aaPredicted RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 QSOX2Q6ZRP7 698 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 SEM1Q6ZVN7 128 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 TRILQ7L0X0 811 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 ASPGQ86U10 573 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 CXorf67Q86X51 503 aaPredicted RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 CAMKVQ8NCB2 501 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 FBXO15Q8NCQ5 510 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms