RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 RHBDF1Q96CC6 855 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 HSPA12BQ96MM6 686 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RANBP3Q9H6Z4 567 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RBBP9O75884 186 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 DIRAS1O95057 198 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RPS13P62277 151 aaKnown RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 KCNAB2Q13303 367 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 LASP1Q14847 261 aaKnown RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 TCEAL1Q15170 157 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ZNF181Q2M3W8 571 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 C6orf141Q5SZD1 244 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 LNX2Q8N448 690 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 PHOSPHO1Q8TCT1 267 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ADAMTS10Q9H324 1103 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR51B5Q9H339 312 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 TIGARQ9NQ88 270 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 MS4A12Q9NXJ0 267 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 NOX1Q9Y5S8 564 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 CLCA1A8K7I4 914 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 MTX2O75431 263 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 SOX14O95416 240 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 C6orf47O95873 294 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 UQCRC2P22695 453 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 HTR1EP28566 365 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 GDF5P43026 501 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ZNF81P51508 661 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 MSS51Q4VC12 460 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 NANOGP8Q6NSW7 305 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 SLC27A4Q6P1M0 643 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 MMAAQ8IVH4 418 aaKnown RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 MFSD2AQ8NA29 543 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 POTEKPQ9BYX7 375 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 NANOGQ9H9S0 305 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 SMURF1Q9HCE7 757 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 SRRDQ9UH36 339 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RNF11Q9Y3C5 154 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 A0A096LPI6 279 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 A0A0U1RQF3 1178 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 M0R129 80 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 PRKCGP05129 697 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ENTPD1P49961 510 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RABGGTBP53611 331 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 TUBB3Q13509 450 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 PIAS4Q8N2W9 510 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ZNF709Q8N972 641 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 ZNF675Q8TD23 568 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 CMKLR1Q99788 373 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR10A4Q9H209 315 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 RETREG1Q9H6L5 497 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 PTGES2Q9H7Z7 377 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 NLE1Q9NVX2 485 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 EXTL2Q9UBQ6 330 aa12.76□□□□□ -0.37
CSPG4P11-201ENST00000560634 FAAHO00519 579 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 SCAMP1O15126 338 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 S1PR1P21453 382 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 PROZP22891 400 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 INCA1Q0VD86 236 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 HNRNPA0Q13151 305 aaKnown RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 ARSKQ6UWY0 536 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 TMEM156Q8N614 296 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 RPLP0P6Q8NHW5 317 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 TMEM248Q9NWD8 314 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 GLS2Q9UI32 602 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 PRKYO43930 277 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 IFNA2P01563 188 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 ADH5P11766 374 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 HSD3B1P14060 373 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 ZNF182P17025 639 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 CELP19835 753 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 HSD3B2P26439 372 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 MAGEA8P43361 318 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 LIPJQ5W064 366 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 GDF6Q6KF10 455 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 ASCC1Q8N9N2 400 aaKnown RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 C7orf57Q8NEG2 295 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR8J1Q8NGP2 316 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 OR5P2Q8WZ92 322 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 MUS81Q96NY9 551 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 TRIB3Q96RU7 358 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 TMEM14AQ9Y6G1 99 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 NFAT5O94916 1531 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 BLOC1S5-TXNDC5H3BN57 136 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 TYROBPO43914 113 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 BDKRB1P46663 353 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 MAN2A2P49641 1150 aa12.75□□□□□ -0.37
CSPG4P11-201ENST00000560634 CTC1Q2NKJ3 1217 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms