RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CCT8L2Q96SF2 557 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 TUBGCP2Q9BSJ2 902 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 NUP85Q9BW27 656 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 SLITRK2Q9H156 845 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 XKR8Q9H6D3 395 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 DEPPQ9NTK1 212 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 SPRR3Q9UBC9 169 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 NKX1-2Q9UD57 310 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 C19orf25Q9UFG5 118 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 PCDHA3Q9Y5H8 950 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 PCDHA13Q9Y5I0 950 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 MAGED1Q9Y5V3 778 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 U3KQE9 123 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 SACSQ9NZJ4 4579 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 KIAA1549Q9HCM3 1950 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 TRGV5A0A0B4J1U4 118 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 ATP6AP2A0A1C7CYW4 349 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 PINLYPA6NC86 204 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 FCHO1O14526 889 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 SMAD9O15198 467 aaKnown RBP5.88□□□□□ -1.47
HERC1-208ENST00000560462 PRPF4O43172 522 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERC1-208ENST00000560462 ATP6AP2O75787 350 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 CLEC2LP0C7M8 214 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 PEX2P28328 305 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 HSPA9P38646 679 aaKnown RBP5.88□□□□□ -1.47
HERC1-208ENST00000560462 KCNC1P48547 511 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 CCT5P48643 541 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 SLC10A7Q0GE19 358 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 SLC10A1Q14973 349 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 ANKRD20A8PQ5CZ79 823 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 BEX5Q5H9J7 111 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 FNBP1LQ5T0N5 605 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 NSUN5P2Q63ZY6 315 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 SARM1Q6SZW1 724 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 DEF8Q6ZN54 512 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 TRAM1L1Q8N609 369 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 TMEM251Q8N6I4 163 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 SNX31Q8N9S9 440 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 OR2M7Q8NG81 312 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 OR52E1Q8NGJ3 308 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 GDAP1Q8TB36 358 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 FAM168AQ92567 244 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 PROX1Q92786 737 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 KAT5Q92993 513 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 FOXRED1Q96CU9 486 aaPredicted RBP5.88□□□□□ -1.47
HERC1-208ENST00000560462 RBM41Q96IZ5 413 aaKnown RBP5.88□□□□□ -1.47
HERC1-208ENST00000560462 RMDN2Q96LZ7 410 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 C11orf70Q9BRQ4 267 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 G6PC3Q9BUM1 346 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 POFUT1Q9H488 388 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 MKKSQ9NPJ1 570 aaPredicted RBP5.88□□□□□ -1.47
HERC1-208ENST00000560462 SPHK1Q9NYA1 384 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 ASH2LQ9UBL3 628 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 DUSP10Q9Y6W6 482 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 MORC2Q9Y6X9 1032 aaPredicted RBP5.88□□□□□ -1.47
HERC1-208ENST00000560462 DNAH1Q9P2D7 4330 aa5.88□□□□□ -1.47
HERC1-208ENST00000560462 SLC5A10A0PJK1 596 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 A8MXE2 369 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 M0QZ24 198 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 FRS3O43559 492 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 ZNF354AO60765 605 aaPredicted RBP5.87□□□□□ -1.47
HERC1-208ENST00000560462 GLSO94925 669 aaPredicted RBP5.87□□□□□ -1.47
HERC1-208ENST00000560462 F13BP05160 661 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 DANCRP0C864 163 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 KRT5P13647 590 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 APEHP13798 732 aaKnown RBP5.87□□□□□ -1.47
HERC1-208ENST00000560462 TPSB2P20231 275 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 MAGP20916 626 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 GCH1P30793 250 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 DIO3P55073 304 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 IL10RBQ08334 325 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 FAM27E3Q08E93 113 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 TPSAB1Q15661 275 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 BEAN1Q3B7T3 259 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 RAB6CQ53S08 254 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 RALGPS1Q5JS13 557 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 TCERG1LQ5VWI1 586 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 RUSC1-AS1Q66K80 236 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 OR2C3Q8N628 320 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 GPR26Q8NDV2 337 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 TSPEARQ8WU66 669 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 LRTOMTQ8WZ04 291 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 CLIC6Q96NY7 704 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 LYSMD1Q96S90 227 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 CYTH2Q99418 400 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 SELENOSQ9BQE4 189 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 CNPY3Q9BT09 278 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 SLC39A8Q9C0K1 460 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 WDR12Q9GZL7 423 aaKnown RBP5.87□□□□□ -1.47
HERC1-208ENST00000560462 RAB6CQ9H0N0 254 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 CLSTN2Q9H4D0 955 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 MYOTQ9UBF9 498 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 CDC14AQ9UNH5 594 aa5.87□□□□□ -1.47
HERC1-208ENST00000560462 TRAF3IP3Q9Y228 551 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms