RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GALR3O60755 368 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 SYF2O95926 243 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 CELA3AP09093 270 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 CCDC175P0C221 793 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 CHRM3P20309 590 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 MAGEA5P43359 124 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 SSR4P51571 173 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 MEF2AQ02078 507 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 HERC3Q15034 1050 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 RPS6KA1Q15418 735 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 FBXW10Q5XX13 1052 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 CAPN13Q6MZZ7 669 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 SEM1Q6ZVN7 128 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 FAM109AQ8N4B1 249 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 ZNF740Q8NDX6 193 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 B3GNT7Q8NFL0 401 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 SLC35B2Q8TB61 432 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 RNASE6Q93091 150 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 SLC30A3Q99726 388 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 TSGA10Q9BZW7 698 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 ACAD8Q9UKU7 415 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 ERVK-11Q9UQG0 969 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 A8MVJ9 347 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 MIF4GDA9UHW6 222 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 H3BMM5 538 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 H7C1Q1 480 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 ESR1P03372 595 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 EPXP11678 715 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 ARNTP27540 789 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 NMBRP28336 390 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 SKIV2L2P42285 1042 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 ASCL1P50553 236 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 CRADDP78560 199 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 HYAL2Q12891 473 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 SIX1Q15475 284 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 DEFB134Q4QY38 66 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 XKR6Q5GH73 641 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 PCID2Q5JVF3 399 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 NDUFAF5Q5TEU4 345 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 SYCE1Q8N0S2 351 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 MFSD9Q8NBP5 474 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 NAXEQ8NCW5 288 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 ASB11Q8WXH4 323 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 LIN28AQ9H9Z2 209 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 CCDC177Q9NQR7 707 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 HPF1Q9NWY4 346 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 ALKBH4Q9NXW9 302 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 DRG1Q9Y295 367 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 YARS2Q9Y2Z4 477 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-213ENST00000560127 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 GOLGA8KD6RF30 607 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 GOLGA8TH3BQL2 631 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 GFYI3L273 518 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 SUSD5O60279 629 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 OR2J2O76002 312 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 MYO1DO94832 1006 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 OR6B1O95007 311 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 SLC35G6P0C7Q6 338 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 ALOX12P18054 663 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 ENDOUP21128 410 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 BMP5P22003 454 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 FDFT1P37268 417 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 MAN2A2P49641 1150 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 CLCN7P51798 805 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 GPR143P51810 404 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 ADARP55265 1226 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 TBPL1P62380 186 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 Q5PR19 223 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 WLSQ5T9L3 541 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 IL20RBQ6UXL0 311 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 SLC13A5Q86YT5 568 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 GPALPP1Q8IXQ4 340 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 VWA5B2Q8N398 1253 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 TXLNBQ8N3L3 684 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 OTUD6BQ8N6M0 293 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 GIMAP7Q8NHV1 300 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 ASB15Q8WXK1 588 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 ATG4AQ8WYN0 398 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 SARAFQ96BY9 339 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 VMP1Q96GC9 406 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 FAM129AQ9BZQ8 928 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 IL1RL2Q9HB29 575 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 PRDM9Q9NQV7 894 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 TRMT1Q9NXH9 659 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 SPRR3Q9UBC9 169 aa11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 PPIEQ9UNP9 301 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-213ENST00000560127 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■■□□ 15.4
RABGGTA-213ENST00000560127 ATP6AP2A0A1C7CYW4 349 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 GOLGA6L9A6NEM1 432 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 TUBAL3A6NHL2 446 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 CLCA1A8K7I4 914 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 HSPB2A8KAH6 182 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 E7EVH7 732 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 DVL2O14641 736 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms