RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 KCNE2Q9Y6J6 123 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CACNA1BQ00975 2339 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HEATR5BQ9P2D3 2071 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 MN1Q10571 1320 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 COL5A1P20908 1838 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 IGHV5-10-1A0A0J9YXX1 117 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 OR2A25A4D2G3 310 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 FAM221BA6H8Z2 402 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ZNF860A6NHJ4 632 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ZNF839A8K0R7 811 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 MATN2O00339 956 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 OR1F1O43749 312 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 SNX3O60493 162 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 DNAJB6O75190 326 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 PEX11AO75192 247 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 PRKRAO75569 313 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 CCNDBP1O95273 360 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 EIF2S1P05198 315 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 ALDOCP09972 364 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 ZNF883P0CG24 379 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 UROSP10746 265 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 EZRP15311 586 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 FOLR1P15328 257 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ALOX15P16050 662 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 CKMT2P17540 419 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 GNAZP19086 355 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 CCND1P24385 295 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 HSD17B2P37059 387 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 FOXL2P58012 376 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 VSX2P58304 361 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 RPL38P63173 70 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 IFT88Q13099 833 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 E2F2Q14209 437 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 LSM12Q3MHD2 195 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 GGTA1PQ4G0N0 100 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 XKR7Q5GH72 579 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 TOR1AIP1Q5JTV8 583 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 PHF19Q5T6S3 580 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 CACHD1Q5VU97 1274 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 FRG2Q64ET8 278 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 NXNQ6DKJ4 435 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 MED27Q6P2C8 311 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 FBXO42Q6P3S6 717 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 DHRS13Q6UX07 377 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 DBX2Q6ZNG2 339 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 TMPRSS7Q7RTY8 843 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 CPLX4Q7Z7G2 160 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 PIP4P1Q86T03 277 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 RBM12BQ8IXT5 1001 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 MMP21Q8N119 569 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 METTL27Q8N6F8 245 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 ABHD11Q8NFV4 315 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 OR7G3Q8NG95 312 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 CLHC1Q8NHS4 586 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 WDR48Q8TAF3 677 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ZFPM2Q8WW38 1151 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 SELENOMQ8WWX9 145 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 GRAMD1AQ96CP6 724 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 TUBGCP3Q96CW5 907 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 WDR34Q96EX3 536 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 APIPQ96GX9 242 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 KIRREL1Q96J84 757 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 CATSPER2Q96P56 530 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 FRG2BQ96QU4 278 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 F2RL3Q96RI0 385 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 TRMOQ9BU70 441 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 EFCAB11Q9BUY7 163 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 SLC29A3Q9BZD2 475 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ILKAPQ9H0C8 392 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 OR51B5Q9H339 312 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 LRRN3Q9H3W5 708 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ELOVL6Q9H5J4 265 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 MEAF6Q9HAF1 191 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 EML4Q9HC35 981 aaKnown RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 DMRT3Q9NQL9 472 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 GPRC5BQ9NZH0 403 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ARMCX1Q9P291 453 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 SLC12A4Q9UP95 1085 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 CCL27Q9Y4X3 112 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 POLR3HQ9Y535 204 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 PCDHGB2Q9Y5G2 931 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.97□□□□□ -1.61
SPG11-220ENST00000559933 PCM1Q15154 2024 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 ATRXP46100 2492 aa4.97□□□□□ -1.61
SPG11-220ENST00000559933 MDC1Q14676 2089 aaKnown RBP4.96□□□□□ -1.61
SPG11-220ENST00000559933 SETXQ7Z333 2677 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 RIF1Q5UIP0 2472 aaKnown RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 A0A1W2PNU3 283 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 TRBC2A0A5B9 178 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 FAM149AA5PLN7 773 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TLCD2A6NGC4 264 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 TMEM150CB9EJG8 249 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 D6RAR5 112 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 PROB1E7EW31 1015 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 H0YGG7 62 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 H0YIV9 168 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 NTN3O00634 580 aaPredicted RBP4.96□□□□□ -1.62
SPG11-220ENST00000559933 PLPP1O14494 284 aa4.96□□□□□ -1.62
SPG11-220ENST00000559933 NDUFAB1O14561 156 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms