RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 LRTOMTQ8WZ04 291 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 SLC6A16Q9GZN6 736 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 DUSP15Q9H1R2 295 aaPredicted RBP12.09□□□□□ -0.47
USP3-213ENST00000559711 TPT1P8Q9HAU6 139 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 PRDM7Q9NQW5 492 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 DLGAP2Q9P1A6 1054 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 THEGQ9P2T0 379 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 ZNF282Q9UDV7 671 aaPredicted RBP12.09□□□□□ -0.47
USP3-213ENST00000559711 MUTYHQ9UIF7 546 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 LRP4O75096 1905 aa12.08□□□□□ -0.47
USP3-213ENST00000559711 GSTA4O15217 222 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 PPM1DO15297 605 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 ABCB1P08183 1280 aaPredicted RBP12.08□□□□□ -0.48
USP3-213ENST00000559711 ACADSP16219 412 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
USP3-213ENST00000559711 EFNA1P20827 205 aaPredicted RBP12.08□□□□□ -0.48
USP3-213ENST00000559711 MAGP20916 626 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 ATP6V1C1P21283 382 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 SOX11P35716 441 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 HBA1P69905 142 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 HHEXQ03014 270 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 SLC14A1Q13336 389 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 TJAP1Q5JTD0 557 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
USP3-213ENST00000559711 CPZQ66K79 652 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 FCRL6Q6DN72 434 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 MRM1Q6IN84 353 aaKnown RBP12.08□□□□□ -0.48
USP3-213ENST00000559711 FIGLAQ6QHK4 219 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 SPESP1Q6UW49 350 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 ZNF793Q6ZN11 406 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 ERMP1Q7Z2K6 904 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 TRIM73Q86UV7 250 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 GKN2Q86XP6 184 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 MMP21Q8N119 569 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 SDR16C5Q8N3Y7 309 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 AMER3Q8N944 861 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 AVL9Q8NBF6 648 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 CATSPER1Q8NEC5 780 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 OR4A15Q8NGL6 344 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 OR10G6Q8NH81 332 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 NT5CQ8TCD5 201 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 ZFP90Q8TF47 636 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 TM4SF19Q96DZ7 209 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 THAP11Q96EK4 314 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 NAF1Q96HR8 494 aaKnown RBP12.08□□□□□ -0.48
USP3-213ENST00000559711 ZNF570Q96NI8 536 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 KCNC2Q96PR1 638 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 OR2A5Q96R48 311 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 C17orf62Q9BQA9 187 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 MIEF1Q9NQG6 463 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 HRASLS2Q9NWW9 162 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 TAS2R7Q9NYW3 318 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 ANAPC2Q9UJX6 822 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 PILRAQ9UKJ1 303 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 VPS4AQ9UN37 437 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 PCDHGB4Q9UN71 923 aa12.08□□□□□ -0.48
USP3-213ENST00000559711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 CCDC163A0A0D9SF12 145 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 GSAPA4D1B5 854 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 CXCR6O00574 342 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 VILLO15195 856 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 ERI3O43414 337 aaKnown RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 KCNK5O95279 499 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 C6orf47O95873 294 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 C1QCP02747 245 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 RETP07949 1114 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 BMP2P12643 396 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 DRD2P14416 443 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 SSR2P43308 183 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 STXBP1P61764 594 aaKnown RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 GAB1Q13480 694 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 SIM2Q14190 667 aaPredicted RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 LRRC36Q1X8D7 754 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 TOR1AIP1Q5JTV8 583 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 HMBOX1Q6NT76 420 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 PDSS2Q86YH6 399 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 TMEFF1Q8IYR6 380 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 ZCCHC7Q8N3Z6 543 aaKnown RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 POP5Q969H6 163 aaKnown RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 CIDECQ96AQ7 238 aaPredicted RBP12.07□□□□□ -0.48
USP3-213ENST00000559711 MACROD1Q9BQ69 325 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 SPATA9Q9BWV2 254 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 TRIM4Q9C037 500 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 UCK1Q9HA47 277 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 TAS2R9Q9NYW1 312 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 CORO2BQ9UQ03 480 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
USP3-213ENST00000559711 A0A1W2PRB8 838 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 OR5K3A6NET4 321 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 B4DGG1 531 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 C4orf51C9J302 202 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 CTSVO60911 334 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 CREG1O75629 220 aa12.06□□□□□ -0.48
USP3-213ENST00000559711 TIPRLO75663 272 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms