RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 NECTIN3Q9NQS3 549 aa8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 PNO1Q9NRX1 252 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 CATSPERZQ9NTU4 200 aa8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 SPTLC3Q9NUV7 552 aa8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 TUBA8Q9NY65 449 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 ANAPC5Q9UJX4 755 aa8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 ZNF223Q9UK11 482 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 SH2B3Q9UQQ2 575 aa8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 EIF3LQ9Y262 564 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-208ENST00000559686 A0A1B0GVC2 190 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 SH3D21A4FU49 640 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 CLDN4O14493 209 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 PSTPIP1O43586 416 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 LCMT2O60294 686 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 NIPSNAP2O75323 286 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 SNRPBP14678 240 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 CNR1P21554 472 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 JAK1P23458 1154 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 PPP2R1BP30154 601 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 FMO4P31512 558 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 PPARGP37231 505 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 ZNF136P52737 540 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 RPS15AP62244 130 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 DMTNQ08495 405 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 NR1I3Q14994 352 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 KLHL38Q2WGJ6 581 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 FBXL19-AS1Q494R0 122 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 DEFB134Q4QY38 66 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 HECTD2Q5U5R9 776 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 RBM43Q6ZSC3 357 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 KIAA0408Q6ZU52 694 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 ASPGQ86U10 573 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 RCOR2Q8IZ40 523 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 FAM71DQ8N9W8 422 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 APCDD1LQ8NCL9 501 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 B3GNT7Q8NFL0 401 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 ZNF480Q8WV37 535 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 SLC13A3Q8WWT9 602 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 KRT35Q92764 455 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 PIGTQ969N2 578 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 NCLNQ969V3 563 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 PDLIM2Q96JY6 352 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 PPP1R2P1Q96PQ5 205 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 FAM173AQ9BQD7 235 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 CCDC77Q9BR77 488 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 IL1RL2Q9HB29 575 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 C6orf203Q9P0P8 240 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 GALPQ9UBC7 116 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 FOXD3Q9UJU5 478 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 CAPN11Q9UMQ6 739 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 YARS2Q9Y2Z4 477 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.28□□□□□ -1.085e-8■□□□□ 11.1
SNRPA1-208ENST00000559686 ANK2Q01484 3957 aa8.28□□□□□ -1.08
SNRPA1-208ENST00000559686 MYOCOSA0A1B0GUC4 107 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 E7ENX8 843 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 MYO1CO00159 1063 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 CASKO14936 926 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 KPNA5O15131 536 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 CD3EAPO15446 510 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 AKR1B10O60218 316 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 SUSD5O60279 629 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 KIF5CO60282 957 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 NDUFS3O75489 264 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 MATN4O95460 622 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 GAS8O95995 478 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 IL2RAP01589 272 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 CATP04040 527 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 PSMA3P25788 255 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 PIGAP37287 484 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 HNF4AP41235 474 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 SLC1A1P43005 524 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 ABATP80404 500 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 MEF2AQ02078 507 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 TAP2Q03519 686 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 KCNJ11Q14654 390 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 PARP6Q2NL67 630 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 AARS2Q5JTZ9 985 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 CTSL3PQ5NE16 218 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 CAPN13Q6MZZ7 669 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 AADACL2Q6P093 401 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 POMZP3Q6PJE2 187 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 PPP1R21Q6ZMI0 780 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 PCGF5Q86SE9 256 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 LUZP2Q86TE4 346 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 RHOT2Q8IXI1 618 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 LIX1Q8N485 282 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 ZNF740Q8NDX6 193 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 SECISBP2Q96T21 854 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 P2RY12Q9H244 342 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 FAM114A2Q9NRY5 505 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 HOMER3Q9NSC5 361 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 SAMD15Q9P1V8 674 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 ZFATQ9P243 1243 aa8.27□□□□□ -1.09
SNRPA1-208ENST00000559686 A0A087X1B8 175 aa8.26□□□□□ -1.09
SNRPA1-208ENST00000559686 C15orf38-AP3S2A0A0A6YYH1 394 aa8.26□□□□□ -1.09
SNRPA1-208ENST00000559686 TCRBV16S1A1N1A0A5B0 115 aa8.26□□□□□ -1.09
SNRPA1-208ENST00000559686 ZNF839A8K0R7 811 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms