RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RBCK1Q9BYM8 510 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 TTTY12Q9BZ98 90 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ATG10Q9H0Y0 220 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 PLEKHF2Q9H8W4 249 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 IL1RL2Q9HB29 575 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 HPF1Q9NWY4 346 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 IFNKQ9P0W0 207 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SAMD15Q9P1V8 674 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 MARCH4Q9P2E8 410 aaPredicted RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 DRG1Q9Y295 367 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 R3HDM2Q9Y2K5 976 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 TCAF1Q9Y4C2 921 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FAM215AQ9Y5M1 114 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ARID1AO14497 2285 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 JMJD1CQ15652 2540 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FN1P02751 2386 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 TRGV5A0A0B4J1U4 118 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 TRBV11-1A0A0K0K1C0 115 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ATP6AP2A0A1C7CYW4 349 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 TCRBV16S1A1N1A0A5B0 115 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PINLYPA6NC86 204 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 URADA6NGE7 173 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 AHRRA9YTQ3 701 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 E5RI56 91 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 H7C1Q1 480 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 AP3B1O00203 1094 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PSMD12O00232 456 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 CASKO14936 926 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 SMAD7O15105 426 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 SLC16A5O15375 505 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 LCMT2O60294 686 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 HCN1O60741 890 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 GALR3O60755 368 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 SMPD2O60906 423 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 AVILO75366 819 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ATP6AP2O75787 350 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 GLSO94925 669 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 ESR1P03372 595 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 P04436 131 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 RNH1P13489 461 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 ALOX12P18054 663 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 CD53P19397 219 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 BMP5P22003 454 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 TACR1P25103 407 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 CTNNA1P35221 906 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 NPY2RP49146 381 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 NR0B1P51843 470 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 ADARP55265 1226 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 SNRPNP63162 240 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 BTG2P78543 158 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PWP1Q13610 501 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 GBX1Q14549 363 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PHKG1Q16816 387 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ZNF750Q32MQ0 723 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 TTLL9Q3SXZ7 439 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 FBXL19-AS1Q494R0 122 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 C4orf48Q5BLP8 95 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ACSBG2Q5FVE4 666 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 RNF187Q5TA31 235 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 HECTD2Q5U5R9 776 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 MRNIPQ6NTE8 343 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 C11orf63Q6NUN7 778 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PRSS57Q6UWY2 283 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 IL20RBQ6UXL0 311 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ABHD13Q7L211 337 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 C17orf64Q86WR6 236 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 REXO1L1PQ8IX06 675 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 LRRC56Q8IYG6 542 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 FBXW8Q8N3Y1 598 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 AFAP1L2Q8N4X5 818 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 TMEM251Q8N6I4 163 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 GPATCH11Q8N954 259 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 MFSD9Q8NBP5 474 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 LINC01560Q8TB33 94 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ASB11Q8WXH4 323 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 SLCO2A1Q92959 643 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PIGTQ969N2 578 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 VMP1Q96GC9 406 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 COX4I2Q96KJ9 171 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 SGCZQ96LD1 299 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 CCDC138Q96M89 665 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 BIRC8Q96P09 236 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PIP5K1AQ99755 562 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 FAM173AQ9BQD7 235 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 GOLPH3Q9H4A6 298 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ETNK1Q9HBU6 452 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 CCDC177Q9NQR7 707 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 CHRAC1Q9NRG0 131 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 DEPPQ9NTK1 212 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ZFATQ9P243 1243 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 KLHL42Q9P2K6 505 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ZNF629Q9UEG4 869 aaPredicted RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 CRYL1Q9Y2S2 319 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 PCDHGB3Q9Y5G1 929 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.81□□□□□ -1.64
SPG11-208ENST00000558155 HIVEP2P31629 2446 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 NINQ8N4C6 2090 aa4.81□□□□□ -1.64
SPG11-208ENST00000558155 ZNF469Q96JG9 3925 aaPredicted RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 ZNF860A6NHJ4 632 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms