RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 APIPQ96GX9 242 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 LIN37Q96GY3 246 aaPredicted RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 TEFMQ96QE5 360 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 MRPL1Q9BYD6 325 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 DPY30Q9C005 99 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 B3GNT4Q9C0J1 378 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 SYNPO2LQ9H987 977 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 LYRM4Q9HD34 91 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 SDR39U1Q9NRG7 319 aaPredicted RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 TXLNGQ9NUQ3 528 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 ATAD3AQ9NVI7 634 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 PSME2Q9UL46 239 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 LOC105369274A0A096LPK9 316 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 LOC102723532A0A0G2JNH3 316 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 PSMD12O00232 456 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 PLPP1O14494 284 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 FCHO1O14526 889 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 POLR1CO15160 346 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 HYAL3O43820 417 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 SLC22A3O75751 556 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 NSA2O95478 260 aaKnown RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 MT-CO3P00414 261 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 STATHP02808 62 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 IL6P05231 212 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 KLK1P06870 262 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 CD63P08962 238 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 SMIM10L1P0DMW3 83 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 FGF5P12034 268 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 BCKDHAP12694 445 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 JAK1P23458 1154 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 ATP5A1P25705 553 aaKnown RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 HNRNPH1P31943 449 aaKnown RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 BUD31P41223 144 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 PDX1P52945 283 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 PLA2G16P53816 162 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 CLDN8P56748 225 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 C21orf58P58505 322 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 SIM1P81133 766 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 INSM1Q01101 510 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 MC2RQ01718 297 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 STX5Q13190 355 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 ISXQ2M1V0 245 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
TPM1-209ENST00000558072 FRMPD2BQ6IN97 320 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 CEACAM20Q6UY09 585 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 OR4N4Q8N0Y3 316 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 TMEM132CQ8N3T6 1108 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 RCBTB1Q8NDN9 531 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 VPS37AQ8NEZ2 397 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 PROKR1Q8TCW9 393 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 ZNF501Q96CX3 271 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 C11orf24Q96F05 449 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 ZNF764Q96H86 408 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 SMIM10Q96HG1 83 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 C17orf62Q9BQA9 187 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 DPH2Q9BQC3 489 aaPredicted RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 ASPSCR1Q9BZE9 553 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 MYNNQ9NPC7 610 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 SAR1AQ9NR31 198 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 CLCA2Q9UQC9 943 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 MRPS33Q9Y291 106 aaKnown RBP11.79□□□□□ -0.52
TPM1-209ENST00000558072 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 GPR45Q9Y5Y3 372 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 PTGDR2Q9Y5Y4 395 aa11.79□□□□□ -0.52
TPM1-209ENST00000558072 WDR87Q6ZQQ6 2873 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 CCDC187A0A096LP49 1063 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 BBIP1A8MTZ0 92 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 DKK1O94907 266 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 ETHE1O95571 254 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 CTSBP07858 339 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 ZNF888P0CJ79 500 aaPredicted RBP11.78□□□□□ -0.52
TPM1-209ENST00000558072 G6PDP11413 515 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 FOLR1P15328 257 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 PPP2R1BP30154 601 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 BSGP35613 385 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 RASSF2P50749 326 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 KCNK10P57789 538 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 BTN3A2P78410 334 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 FOXM1Q08050 763 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 HYAL2Q12891 473 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 BIKQ13323 160 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 KRT72Q14CN4 511 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 DEFB110Q30KQ9 67 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 MSANTD1Q6ZTZ1 278 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 CLNKQ7Z7G1 428 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 LIX1Q8N485 282 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 KCT2Q8NC54 265 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 DNAJB8Q8NHS0 232 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 RP9Q8TA86 221 aaKnown RBP11.78□□□□□ -0.52
TPM1-209ENST00000558072 CATSPER2Q96P56 530 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 SLC25A23Q9BV35 468 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 MYLK2Q9H1R3 596 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 PRDM7Q9NQW5 492 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 CUTCQ9NTM9 273 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms