RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SP1P08047 785 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 C1GALT1C1LP0DN25 315 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 ESRRAP11474 423 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 ZNF24P17028 368 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 NME2P22392 152 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 GSTM2P28161 218 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 SLC6A12P48065 614 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 CYB561P49447 251 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 MLF1P58340 268 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 TGFBIQ15582 683 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 C3AR1Q16581 482 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 MAPKAPK3Q16644 382 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 SP5Q6BEB4 398 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 BNC2Q6ZN30 1099 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 SLCO4C1Q6ZQN7 724 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 MRGPRGQ86SM5 289 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 TCAIMQ8N3R3 496 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 TMEM125Q96AQ2 219 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 CAPS2Q9BXY5 557 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 CNOT10Q9H9A5 744 aaKnown RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 SAYSD1Q9NPB0 183 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 NECTIN3Q9NQS3 549 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 DNAJC11Q9NVH1 559 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 TINAGQ9UJW2 476 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 NPIPA1Q9UND3 350 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 CRYBG3Q68DQ2 2970 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 MYO7BQ6PIF6 2116 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 A0A0G2JN53 185 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 TRBV11-1A0A0K0K1C0 115 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 B3GALT2O43825 422 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 MYO1DO94832 1006 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 SMIM10L1P0DMW3 83 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 TERF2Q15554 542 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 ZNF468Q5VIY5 522 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-235ENST00000557740 GPSM1Q86YR5 675 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 KLHDC8AQ8IYD2 350 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 SPATA6LQ8N4H0 392 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 SNX31Q8N9S9 440 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 SMIM10Q96HG1 83 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 SEC16BQ96JE7 1060 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 MCMBPQ9BTE3 642 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 PITHD1Q9GZP4 211 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-235ENST00000557740 AICDAQ9GZX7 198 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 DPH5Q9H2P9 285 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 CAB39LQ9H9S4 337 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 PRM3Q9NNZ6 103 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 PNO1Q9NRX1 252 aaKnown RBP13.69□□□□□ -0.22
SHMT2-235ENST00000557740 GPRC5BQ9NZH0 403 aa13.69□□□□□ -0.22
SHMT2-235ENST00000557740 MRPS33Q9Y291 106 aaKnown RBP13.69□□□□□ -0.22
SHMT2-235ENST00000557740 MTO1Q9Y2Z2 717 aaKnown RBP13.69□□□□□ -0.22
SHMT2-235ENST00000557740 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 ANKDD1BA6NHY2 528 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CLDN4O14493 209 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CLGNO14967 610 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 WISP2O76076 250 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 S100BP04271 92 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CCDC166P0CW27 439 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 ABOP16442 354 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 HTR1EP28566 365 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 TNFRSF8P28908 595 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 HNRNPH1P31943 449 aaKnown RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 TRHRP34981 398 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 HLCSP50747 726 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CLCN2P51788 898 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SMSP52788 366 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 PLA2G16P53816 162 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 RAB38P57729 211 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SLC13A2Q13183 592 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 PDK4Q16654 411 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 TRIM40Q6P9F5 258 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SIAH3Q8IW03 269 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SCUBE1Q8IWY4 988 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SRRM1Q8IYB3 904 aaKnown RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 GHDCQ8N2G8 530 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 FAM47BQ8NA70 645 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 NFAM1Q8NET5 270 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 MS4A6EQ96DS6 147 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CPNE1Q99829 537 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 TMEM79Q9BSE2 394 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 NPLQ9BXD5 320 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 REXO4Q9GZR2 422 aaKnown RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 EHD1Q9H4M9 534 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 COPS7BQ9H9Q2 264 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CHST11Q9NPF2 352 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 PRTFDC1Q9NRG1 225 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 SMYD2Q9NRG4 433 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 CD274Q9NZQ7 290 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 WHRNQ9P202 907 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 FBXW2Q9UKT8 454 aa13.68□□□□□ -0.22
SHMT2-235ENST00000557740 KLF13Q9Y2Y9 288 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-235ENST00000557740 LRIT2A6NDA9 550 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms